| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3283 |
|---|
| Symbol | |
|---|
| ID | 3962430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3644671 |
|---|
| End bp | 3645837 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637918103 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_524523 |
|---|
| Protein GI | 89902052 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGTTT GTATCGTTGG TTGGGCGCAT TCGCCGTTCG GGCGCCTGGA CACGCTGGAT
CTGGAATCAC TGATCGGCGG CGTGACGCGG GCATCGCTTG GACATGCGGG AATCGCGGGC
AGCGAAGTCG ACGGTGTCTG GCTGGGCCAC TTGAACGGCG GCTTCGTGCC GGACATCTTC
ACCTCCTCCC TGGCGCTGCA GGCTGATGAT GCGCTGCGTT GGCGACCCGC CACGCGCGTG
GAGAACGCAT GCGCCTCCGG CGCGGCGGCC CTCTATGCCG CCTGTGATGC GATCGAGGCC
GGGCGTGCGC GCGTGGCGCT GGTCATAGGC GCCGAAAAAA TGACCGGCGT GTCGGGTCCC
GAGGTCACGC GCATCCTGGG CAACGCCTCC TATGTGAAGG AAGAAGCGGC GCGGGGCCTG
ACGTTCCCGG GCATCTTCGC CCAGGTGGCG CTCGCCTATT TCGAACGCTA TGGTGACCAT
TCGGCCACGC TGGCGCATAT TGCGGCCAAG AACCATGCCA ACGGCGTGCG CAACCCGTGG
GCGCAGATGC GCCGGGATCT GGGCTTCGAG TTCTGCAACA CGGTGTCGGA TAGAAACCCG
CTCATCGCGG CACCCTTGCG CAAGACCGAC TGTTCCATGG TCTCGGATGG CGCCGCCGCG
GTGATCCTGG CCGACAGTTC GATCGCCAGA CAATTTCCCC GTGCGGTCGC GTTGCGATCC
CGCGCGCAGG TCAACGACTT TCTGCCGATG TCACGCCGGG ATGCGGTCGC GTTCGAAGGC
CCCCGCCGGG CTTGGGCCAA GGCGCTGGAC AATGCCCGCT GCAGCGTGCA TGACTTGTCG
CTGGCCGAGG TGCATGACTG TTTCACCATT GCCGAGCTGC TGACCTATGA AGCGATGGGC
CTGGCCGCGC CAGGTCAGGG CGCGCGACTG CTGGCCGAAG GTACCGTGGC TGCTGGCGGC
AAGTTGCCGA TCAATCCGTC CGGTGGTCTC AAAGCCAAGG GGCATCCCAT CGGCGCCACC
GGCGTATCGA TGCATGTGCT GGCGGCGATG CAACTGATGG GTGAGGCCGG AGAGATGCAG
GTGCCCGGGG CCGAGCTGGT GGGCGTTTTC AACATGGGGG GTTCCGCGGT GGCCAACTAC
GTCAGCATCC TGGAGCGCCT GCAATGA
|
|---|
| Protein sequence | MGVCIVGWAH SPFGRLDTLD LESLIGGVTR ASLGHAGIAG SEVDGVWLGH LNGGFVPDIF
TSSLALQADD ALRWRPATRV ENACASGAAA LYAACDAIEA GRARVALVIG AEKMTGVSGP
EVTRILGNAS YVKEEAARGL TFPGIFAQVA LAYFERYGDH SATLAHIAAK NHANGVRNPW
AQMRRDLGFE FCNTVSDRNP LIAAPLRKTD CSMVSDGAAA VILADSSIAR QFPRAVALRS
RAQVNDFLPM SRRDAVAFEG PRRAWAKALD NARCSVHDLS LAEVHDCFTI AELLTYEAMG
LAAPGQGARL LAEGTVAAGG KLPINPSGGL KAKGHPIGAT GVSMHVLAAM QLMGEAGEMQ
VPGAELVGVF NMGGSAVANY VSILERLQ
|
|---|
| |