Gene Rfer_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3282 
Symbol 
ID3962429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3643984 
End bp3644592 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content65% 
IMG OID637918102 
ProductLuxR family transcriptional regulator 
Protein accessionYP_524522 
Protein GI89902051 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAC CCCTCTCCAC CCGCACCGCG CAGCACACCG CTGCGTCGCA AGAACCCGCG 
CTGGCCGAGG ACGATCTGGG GCTGGTATTC GATCTGGCAC CGGTGGGTCT GTGCATCTCG 
CGCGAACGCA CGATCCAGCG CTGCAACGCG GCCTTCGGTG CGATGTTCGG CTACGCCCCG 
GCGGAGCTGC AAGGTCGCTC GCTCGAATGC CTCTACCCCT CGCGCAGCGA GTTCGAGCAC 
ATCGGCGCGC AGGGTTTTCC GGTGATGCAA AGGACCAGCC ACTACAGTGA CGAGCGCATC 
ATGTGTCACC GCAGTGGCCG CCTGTTCTGG TGCCATGTGG CGGGCCGTTC GCTGCAGCGT 
GACCAGCCCT TCGCCTGTGC CGTCTGGATG TTCGAGGACA TCTCGTCGCG TCGACCGGTG 
GCCATGACCC TGACCGCCCG TGAACGCGAG ATCGTACGTC AGCTCGCGGC CGGCCAGGGT 
ACCAAGCAAA TTGCCCGCAC CCTGGGGGTG AGTCCGCGCA CCATCGATGG GCACCGCGCG 
CGCATCATGA GAAAAGTCGG CGCGCAGAGT TCAAGCGAAA TGATTGCCAA GCTGATCGGC 
TTGAGTTGA
 
Protein sequence
MTEPLSTRTA QHTAASQEPA LAEDDLGLVF DLAPVGLCIS RERTIQRCNA AFGAMFGYAP 
AELQGRSLEC LYPSRSEFEH IGAQGFPVMQ RTSHYSDERI MCHRSGRLFW CHVAGRSLQR 
DQPFACAVWM FEDISSRRPV AMTLTARERE IVRQLAAGQG TKQIARTLGV SPRTIDGHRA 
RIMRKVGAQS SSEMIAKLIG LS