Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3275 |
Symbol | metG |
ID | 3962422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3634355 |
End bp | 3636457 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637918095 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_524515 |
Protein GI | 89902044 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACGCC AACTCTTCGT TACCACCGCC CTGCCCTACG CCAATGGCAA TTTCCACATT GGCCACATCA TGGAGTACAT CCAGGCTGAC ATCTGGGTGC GCTACCAGCG GATGATGGGC AACGCGGTGC ATTTTGTCTG CGCCGATGAT TGTCATGGCG CGCCGATCAT GATTGCCGCT GAAAAGGTCG GTAAAACACC GCAGCAGTTT GTGGCCGACA TTGCCAGCGG CCGCAAACCG TATCTGGATG GTTTCCATAT TGGTTTTGAC AACTGGCATT CCACCGACGG CGCGGAAAAC CACGAACTGG CGCAGGCGAT ATACCGTGAT CTCAAGGCCG CTGGCTTGAT CAGCACGCGT GTCATCGCCC AGTTTTTCGA CACCGAGAAG AACATGTTTT TGCCGGACCG CTTCATCAAG GGCGAATGTC CCAAGTGCGG CGCCAAAGAC CAGTACGGCG ACAACTGCGA AGAATGCGGC GCGGTGTACA GCCCGACCGA GTTGAAGAAC CCGTACTCGG CCTTGAGCGG TGTCACCCCT GTGCTACGCG ATTCGGAACA TTACTTTTTC AAATTGTCGG ACCCGCGATG TGTTGAATTT CTGGAACAGT GGACGACGGA CACCAACCCG CGCGGGCAGT CGCGCCTGCA AGCCGAGGTC TACAACAAGA TCAAGGAATG GCTGCTGCCC GATGCCGAGG GCAAGCGTGA CCTGGGCGAC TGGGACATCT CCAGAGACGC ACCCTACTTT GGCATCGAAA TTCCCGATGC GCCGGGCAAA TATTTTTATG TCTGGCTGGA TGCCCCCATC GGTTACCTGG CCGCGCTGAA AAACCGTTTT ATCAAGCTGG CCGGCGACGC CACAACGGGC GCGCAGCATT ACGACGACTT CATGGCCGAC CCGGCGACCG AGCAGTACCA CTTCATCGGC AAGGACATCA TCACTTTCCA CACCCTGTTC TGGCCCGCGA TGCTGCATTT CAGCGGCCGC AAAACGCCCA ACGCGGTGTT TGTGCACGGC TTTTTGACGG TCAACAGCGA GAAGATGAGC AAGAGCCGCG GCACCGGCCT GGACCCGCTC AAGTACCTGA GCCTGGGCAT GAACCCGGAG TGGCTGCGCT ACTACCTGGC GACCAAACTG ACGGCACGCA ACGAGGACGT GGAGTTCAGC CCGGAAGATT TCATGGCGCG GGTCAACAGC GACCTGGTCG GCAAATACAT CAACATCGCG TCACGCGCGG CCGGCTTTAT TGCCAAGCGT TTTGGCGGCC AGCTGGGCGT CATTTCAGAC GACGGGGCGG CGCTGCTGAA ACAGATTCAG ATTGAGCGCA CCAGCATCGA GCAACTTTAT GAGGCGCGCG AATTTGCCAA GGCCTTGCGC GAGACCATGC TGCTGGCCGA TCGGGTGAAT GAGTATGTGG ATGCCAACAA GCCCTGGGAA CTGGCCAAGC AAACCGGTAT GGAGACACGC CTGCACGATG TCTGCACGGT CTGCATCGAA GCCTTCCGGG CACTCACGGC CTACCTCAAG CCGGTGCTGC CCCTGCTGGC GGCGCAGGTG GAAGTTTTCC TCAATATCGA GCCGCTCTCC TTTGCCAGCG TCAGTCAGAC GCTGGGTGCG GTCCACCGCA TTGGGGACTA CAAGCACCTG ATGCAGCGCG TCGATATCAA GCAACTTGAG GCATTGTTTG AGGCGCAAGC CCCCGTGGAA CCTGATAATA TTGCTACAGA ATCAGTAGCA CCTGGCGGAG AAGGCATGGC CCCGGTGATC AGCATGGATG ACTTCAGCAA GATCGACTTG CGTATTGCCA AGATCGTCAA TTGCGAGACA GTTAGTGGCT CTACCAAGCT CTTGCGCCTG ACTTTGGATG TAGGCGAAAC CAACACGCGC AACGTCTTCA GCGGCATTGC AAGCAGCTAC CAACCCGAGC AGCTGATCGG CAAACTCACC GTCATGGTGG CCAACCTGGC GCCGCGCAAA ATGAAGTTCG GTATCAGCGA CGGCATGGTG CTGGCCGCCA GCCATGCCGA CGAAAAAGCC CAGCCCGGCA TTTATATCCT GGAGCCGTTT GCCGGGGCCC AACCGGGCAT GCGGGTGCAT TGA
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Protein sequence | MPRQLFVTTA LPYANGNFHI GHIMEYIQAD IWVRYQRMMG NAVHFVCADD CHGAPIMIAA EKVGKTPQQF VADIASGRKP YLDGFHIGFD NWHSTDGAEN HELAQAIYRD LKAAGLISTR VIAQFFDTEK NMFLPDRFIK GECPKCGAKD QYGDNCEECG AVYSPTELKN PYSALSGVTP VLRDSEHYFF KLSDPRCVEF LEQWTTDTNP RGQSRLQAEV YNKIKEWLLP DAEGKRDLGD WDISRDAPYF GIEIPDAPGK YFYVWLDAPI GYLAALKNRF IKLAGDATTG AQHYDDFMAD PATEQYHFIG KDIITFHTLF WPAMLHFSGR KTPNAVFVHG FLTVNSEKMS KSRGTGLDPL KYLSLGMNPE WLRYYLATKL TARNEDVEFS PEDFMARVNS DLVGKYINIA SRAAGFIAKR FGGQLGVISD DGAALLKQIQ IERTSIEQLY EAREFAKALR ETMLLADRVN EYVDANKPWE LAKQTGMETR LHDVCTVCIE AFRALTAYLK PVLPLLAAQV EVFLNIEPLS FASVSQTLGA VHRIGDYKHL MQRVDIKQLE ALFEAQAPVE PDNIATESVA PGGEGMAPVI SMDDFSKIDL RIAKIVNCET VSGSTKLLRL TLDVGETNTR NVFSGIASSY QPEQLIGKLT VMVANLAPRK MKFGISDGMV LAASHADEKA QPGIYILEPF AGAQPGMRVH
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