Gene Rfer_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3275 
SymbolmetG 
ID3962422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3634355 
End bp3636457 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content58% 
IMG OID637918095 
Productmethionyl-tRNA synthetase 
Protein accessionYP_524515 
Protein GI89902044 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGCC AACTCTTCGT TACCACCGCC CTGCCCTACG CCAATGGCAA TTTCCACATT 
GGCCACATCA TGGAGTACAT CCAGGCTGAC ATCTGGGTGC GCTACCAGCG GATGATGGGC
AACGCGGTGC ATTTTGTCTG CGCCGATGAT TGTCATGGCG CGCCGATCAT GATTGCCGCT
GAAAAGGTCG GTAAAACACC GCAGCAGTTT GTGGCCGACA TTGCCAGCGG CCGCAAACCG
TATCTGGATG GTTTCCATAT TGGTTTTGAC AACTGGCATT CCACCGACGG CGCGGAAAAC
CACGAACTGG CGCAGGCGAT ATACCGTGAT CTCAAGGCCG CTGGCTTGAT CAGCACGCGT
GTCATCGCCC AGTTTTTCGA CACCGAGAAG AACATGTTTT TGCCGGACCG CTTCATCAAG
GGCGAATGTC CCAAGTGCGG CGCCAAAGAC CAGTACGGCG ACAACTGCGA AGAATGCGGC
GCGGTGTACA GCCCGACCGA GTTGAAGAAC CCGTACTCGG CCTTGAGCGG TGTCACCCCT
GTGCTACGCG ATTCGGAACA TTACTTTTTC AAATTGTCGG ACCCGCGATG TGTTGAATTT
CTGGAACAGT GGACGACGGA CACCAACCCG CGCGGGCAGT CGCGCCTGCA AGCCGAGGTC
TACAACAAGA TCAAGGAATG GCTGCTGCCC GATGCCGAGG GCAAGCGTGA CCTGGGCGAC
TGGGACATCT CCAGAGACGC ACCCTACTTT GGCATCGAAA TTCCCGATGC GCCGGGCAAA
TATTTTTATG TCTGGCTGGA TGCCCCCATC GGTTACCTGG CCGCGCTGAA AAACCGTTTT
ATCAAGCTGG CCGGCGACGC CACAACGGGC GCGCAGCATT ACGACGACTT CATGGCCGAC
CCGGCGACCG AGCAGTACCA CTTCATCGGC AAGGACATCA TCACTTTCCA CACCCTGTTC
TGGCCCGCGA TGCTGCATTT CAGCGGCCGC AAAACGCCCA ACGCGGTGTT TGTGCACGGC
TTTTTGACGG TCAACAGCGA GAAGATGAGC AAGAGCCGCG GCACCGGCCT GGACCCGCTC
AAGTACCTGA GCCTGGGCAT GAACCCGGAG TGGCTGCGCT ACTACCTGGC GACCAAACTG
ACGGCACGCA ACGAGGACGT GGAGTTCAGC CCGGAAGATT TCATGGCGCG GGTCAACAGC
GACCTGGTCG GCAAATACAT CAACATCGCG TCACGCGCGG CCGGCTTTAT TGCCAAGCGT
TTTGGCGGCC AGCTGGGCGT CATTTCAGAC GACGGGGCGG CGCTGCTGAA ACAGATTCAG
ATTGAGCGCA CCAGCATCGA GCAACTTTAT GAGGCGCGCG AATTTGCCAA GGCCTTGCGC
GAGACCATGC TGCTGGCCGA TCGGGTGAAT GAGTATGTGG ATGCCAACAA GCCCTGGGAA
CTGGCCAAGC AAACCGGTAT GGAGACACGC CTGCACGATG TCTGCACGGT CTGCATCGAA
GCCTTCCGGG CACTCACGGC CTACCTCAAG CCGGTGCTGC CCCTGCTGGC GGCGCAGGTG
GAAGTTTTCC TCAATATCGA GCCGCTCTCC TTTGCCAGCG TCAGTCAGAC GCTGGGTGCG
GTCCACCGCA TTGGGGACTA CAAGCACCTG ATGCAGCGCG TCGATATCAA GCAACTTGAG
GCATTGTTTG AGGCGCAAGC CCCCGTGGAA CCTGATAATA TTGCTACAGA ATCAGTAGCA
CCTGGCGGAG AAGGCATGGC CCCGGTGATC AGCATGGATG ACTTCAGCAA GATCGACTTG
CGTATTGCCA AGATCGTCAA TTGCGAGACA GTTAGTGGCT CTACCAAGCT CTTGCGCCTG
ACTTTGGATG TAGGCGAAAC CAACACGCGC AACGTCTTCA GCGGCATTGC AAGCAGCTAC
CAACCCGAGC AGCTGATCGG CAAACTCACC GTCATGGTGG CCAACCTGGC GCCGCGCAAA
ATGAAGTTCG GTATCAGCGA CGGCATGGTG CTGGCCGCCA GCCATGCCGA CGAAAAAGCC
CAGCCCGGCA TTTATATCCT GGAGCCGTTT GCCGGGGCCC AACCGGGCAT GCGGGTGCAT
TGA
 
Protein sequence
MPRQLFVTTA LPYANGNFHI GHIMEYIQAD IWVRYQRMMG NAVHFVCADD CHGAPIMIAA 
EKVGKTPQQF VADIASGRKP YLDGFHIGFD NWHSTDGAEN HELAQAIYRD LKAAGLISTR
VIAQFFDTEK NMFLPDRFIK GECPKCGAKD QYGDNCEECG AVYSPTELKN PYSALSGVTP
VLRDSEHYFF KLSDPRCVEF LEQWTTDTNP RGQSRLQAEV YNKIKEWLLP DAEGKRDLGD
WDISRDAPYF GIEIPDAPGK YFYVWLDAPI GYLAALKNRF IKLAGDATTG AQHYDDFMAD
PATEQYHFIG KDIITFHTLF WPAMLHFSGR KTPNAVFVHG FLTVNSEKMS KSRGTGLDPL
KYLSLGMNPE WLRYYLATKL TARNEDVEFS PEDFMARVNS DLVGKYINIA SRAAGFIAKR
FGGQLGVISD DGAALLKQIQ IERTSIEQLY EAREFAKALR ETMLLADRVN EYVDANKPWE
LAKQTGMETR LHDVCTVCIE AFRALTAYLK PVLPLLAAQV EVFLNIEPLS FASVSQTLGA
VHRIGDYKHL MQRVDIKQLE ALFEAQAPVE PDNIATESVA PGGEGMAPVI SMDDFSKIDL
RIAKIVNCET VSGSTKLLRL TLDVGETNTR NVFSGIASSY QPEQLIGKLT VMVANLAPRK
MKFGISDGMV LAASHADEKA QPGIYILEPF AGAQPGMRVH