| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3261 |
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| Symbol | |
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| ID | 3960798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3613752 |
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| End bp | 3616712 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918081 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_524501 |
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| Protein GI | 89902030 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.303919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTGA CCAGAAAATC CGGGCCATCT GACCCTGTTG CCCGTTCCCC ATTTGTGCAC
AGTTTGCGCC GTGGCTTGTC GCAAGCCTTA CCCACGATGG ACCGGCGCGC CTTTTTGCGC
CGCTCCGGCC TGGGTGTGGG CGTCGGGCTC GCGGCCTCGC AACTGACCCT GGTGAAAAAG
GCAGATGCAG CGCAGGGCGC GGTGGCCCTT GGTGAAGGCA AGATCGAGAT CAAGCGCACC
GTGTGTACCC ATTGTTCGGT CGGTTGCGCG GTCGATGCCG TGGTGGAGAA CGGCGTTTGG
GTGCGGCAGG AGCCGGTGTT TGACTCCCCC ATCAACCTCG GCGCCCATTG CGCCAAGGGA
GCCGCCTTGC GCGAGCACGG CCACGGCGAA TTCCGCCTGC GCTACCCGAT GAAACTGGTC
AATGGCAAAT ATCAGCGCAT CAGTTGGGAC ACCGCCTTGA GCGAGATCAG TGCCCGCATG
CTGGAACTGA AAAAAGCCAG TGGCCCGGAC AGTGTGTACT TTGTCGGGTC CTCCAAGCAC
AACAACGAGC AGTCGTACCT GCTGCGCAAG TTTGTCAGCT TCTGGGGCAC CAACAACTGC
GATCACCAGG CCCGTATTTG CCACTCGACC ACGGTGGCCG GTGTGGCCAA TACCTGGGGT
TACGGCGCCA TGACCAACTC TTACAACGAC ATGCAGAACA GCAAATGCGC GTTGTACATC
GGCTCCAACG CGGCCGAGGC GCACCCGGTG AGCATGCTGC ACATGCTGCA CGCCAAGGAA
ACCGGCACCA AGATGATCGT GGTGGACCCG CGCTTTACCC GCACCGCCGC CAAGGCCGAC
GAGTATGTGC GTATTCGTTC CGGCTCCGAC ATCCCCTTCC TGTTTGGCGT GCTGTACCAC
GTGTTCAACA ACGGCTGGGA AGATAAAAAA TACATCAACG ACCGGGTCTA TGGCATGGAC
AAGGTCAAGC TGGATGTGAT GGCCAAGTGG ACGCCTGACA AAGTGGAAGA AGCCTGCGGC
GTCAAAGAAG AGCAGGTGCT GCGCGTCGCC AAAATGATGA GCGACAACCG GCCCAGCACA
CTGGTCTGGT GCATGGGCCA AACCCAGCAC ACCATCGGCA ACGCCATGGT GCGCGCCTCG
TGCATCTTGC AACTTGCGCT GGGCAACGTC GGCAAGTCCG GCGGCGGCAC CAATATTTTC
CGCGGCCACG ACAACGTGCA AGGCGCCACC GATGTCGGCC CCAATCCCGA TTCACTGCCC
GGTTATTACG GCATTGTGGA AGGCTCCTGG AAGCACTTCG CCAAGGTCTG GGGTGTTGAT
TTTGAATGGA TCAAAAAGCA GTTTGCCAGC CCTGCCATGA TGAGCAAGCC CGGTATCACC
GTGTCGCGCT GGATTGACGG TGTGCTGGAG AAAAACGAGC TGATCGACCA GGACTCGAAC
CTGCGTGGTG TGTTTTATTG GGGCCATGCA CCCAATTCTC AAACCCGTGG CCTGGAGATG
AAGCGCGCCA TGGACAAGCT TGATCTGCTG GTGGTGGTGG ACCCCTATCC ATCGGCCACG
GCAGCGATGG CTGCCATGCC CGGCAAACCC GAAGACTTGA ACCCGAACCG GGCGGTCTAT
TTGCTGCCTG CGGCCACGCA GTTCGAAACC AGTGGTTCCG TCACGGCCTC CAATCGCTCC
TTGCAATGGC GTGAAAAAGT CATTGAACCG TTGTGGGAGA GCCGCAGCGA CCACATGATC
ATGCAGCAGT TCGCGGACAA ACTCGGTTTT GGCAAGGAAC TGTCCAAGAA CTACAAGATG
CAAAAAGTCC ATGGCATGGA TGAGCCCATG CCGGAGGAGA TCCTGCGCGA AATCAATGCG
GGCGTCTGGA CCATCGGCTA CACCGGCCAG AGTCCGGAGC GCCTCAAAGC CCACATGCGC
AACATGCACC TGTTTGACGT GAAGACGCTC AAGGCCAAGG GCGGCAAAGA CAAGGAAACC
GGTTACGACT TCACCGGTGA CTACTTTGGC TTGCCTTGGC CCTGTTACGG CACGGCCGCG
CTCAAGCATC CCGGCTCACC CAACCTTTAC GACACCTCCA AACATGTGAT GGACGGCGGT
GGCAACTTCC GCGCCAACTT CGGCGTCGAG CGTGAAGGTG TCAACCTGCT GGCGGAGGAC
GGTTCGTATT CCCTGAACGC CGATATCACC ACCGGTTACC CCGAGTTCGA CCATGTGCTG
CTAAAGAAGC TGGGTTGGTG GGACGACCTC ACCGAGGCGG AGAAGACAGC CGCCGAGGGC
AAGAACTGGA AGACCGACCT CTCGGGAGGC ATCCAGCGTG TGGTCTTGAA AGTGCATGGC
TGCCATCCGT TTGGCAACGC CAAGGCGCGC GCCGTGGTGT GGAACTTCCC GGATGCGATT
CCGCAGCACC GCGAACCCTT GTACGGTATC CGCCCTGATT TGGTGGCCAA GTACCCGACC
CACGACGACA AGAAGGCGTT CTGGCGTTTG CCCACGCTGT ACAAGACGAT TCAGGATAAA
AATATCGCGG ACAAGGTGCA CGAGAAATTC CCGTTCATCA TGACCTCGGG CCGCTTGGTC
GAGTACGAGG GCGGGGGCGA AGAGACCCGC TCCAACCCCT GGCTGGCCGA ATTGCAGCAG
GAGATGTTCA TTGAGATCAA CCCCAAGGTC GCGGCTGACA AGGGCATTCG CAATGGCGAC
CGGGCCTGGG TGTCAACGCC CACCGGTGCG CGCATGAATG TGCAGGCGCT GGTGACCGAG
CGCGTTGGTC CCGATACCGT GTTCTTGCCG TTTCACTTCT CCGGTCGCTG GCAGGGCGCC
GACATGCTGG CCTACTACCC GAATGGCGCG GCGCCGATCG TGCGCGGCGA GGCCATCAAC
ACCAGCACCA CCTATGGCTA CGACAGCGTG ACCATGATGC AGGAAACCAA GACCACCGTT
TGCAACGTCG AGCGGGCCTG A
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| Protein sequence | MLLTRKSGPS DPVARSPFVH SLRRGLSQAL PTMDRRAFLR RSGLGVGVGL AASQLTLVKK
ADAAQGAVAL GEGKIEIKRT VCTHCSVGCA VDAVVENGVW VRQEPVFDSP INLGAHCAKG
AALREHGHGE FRLRYPMKLV NGKYQRISWD TALSEISARM LELKKASGPD SVYFVGSSKH
NNEQSYLLRK FVSFWGTNNC DHQARICHST TVAGVANTWG YGAMTNSYND MQNSKCALYI
GSNAAEAHPV SMLHMLHAKE TGTKMIVVDP RFTRTAAKAD EYVRIRSGSD IPFLFGVLYH
VFNNGWEDKK YINDRVYGMD KVKLDVMAKW TPDKVEEACG VKEEQVLRVA KMMSDNRPST
LVWCMGQTQH TIGNAMVRAS CILQLALGNV GKSGGGTNIF RGHDNVQGAT DVGPNPDSLP
GYYGIVEGSW KHFAKVWGVD FEWIKKQFAS PAMMSKPGIT VSRWIDGVLE KNELIDQDSN
LRGVFYWGHA PNSQTRGLEM KRAMDKLDLL VVVDPYPSAT AAMAAMPGKP EDLNPNRAVY
LLPAATQFET SGSVTASNRS LQWREKVIEP LWESRSDHMI MQQFADKLGF GKELSKNYKM
QKVHGMDEPM PEEILREINA GVWTIGYTGQ SPERLKAHMR NMHLFDVKTL KAKGGKDKET
GYDFTGDYFG LPWPCYGTAA LKHPGSPNLY DTSKHVMDGG GNFRANFGVE REGVNLLAED
GSYSLNADIT TGYPEFDHVL LKKLGWWDDL TEAEKTAAEG KNWKTDLSGG IQRVVLKVHG
CHPFGNAKAR AVVWNFPDAI PQHREPLYGI RPDLVAKYPT HDDKKAFWRL PTLYKTIQDK
NIADKVHEKF PFIMTSGRLV EYEGGGEETR SNPWLAELQQ EMFIEINPKV AADKGIRNGD
RAWVSTPTGA RMNVQALVTE RVGPDTVFLP FHFSGRWQGA DMLAYYPNGA APIVRGEAIN
TSTTYGYDSV TMMQETKTTV CNVERA
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