| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3231 |
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| Symbol | |
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| ID | 3962871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3579350 |
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| End bp | 3580126 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918050 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_524471 |
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| Protein GI | 89902000 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.15277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCCA CGCTTGCCGC TTCGCGTGCT GCGCTGCCCC CCGAGGGGGC TGCCATCGGT
TTGGGGCGGC CCGGCACCGA TGGCGATATT CCTATGGGCG ATATTGTTTT GAGCGCCCGC
GCCATCACCA AGCGTTTTAC CGAAGGCCGG CTCGATGTGA CGGTGCTGCA GGGCGTGGAC
CTGGACGTGC GGGCTGGTGA AACGCTGGCC ATCGTGGGCG CCTCTGGTTC TGGCAAAAGC
ACGCTGCTGC ACTTGATGGG CGGGCTCGAT GCCCCCACCA GTGGTTCGGT GTTCTTGCAC
GGGCAGGACC TGGCGCACCA GAGCGCTGCC GCGCAGGGTC GCTTGCGCAA CCAGTACCTC
GGCTTTGTTT ATCAGTTTCA CCACCTGCTG CCCGAATTCA GCGCCTTGGA CAACGTCGCC
ATGCCTTTAT GGATTCGGCG TCTAGCCCCC GCAGAATCTA CCCATACAGC TACTGAAATG
CTAGCAAAAG TCGGCTTGCA GGAGCGCTTG GCGCATCGAC CGTCAGAGCT CTCGGGCGGC
GAGCGCCAGC GTGTGGCGAT TGCGCGAGCC CTGGTGACCC GCCCAGCCTG CGTGCTGGCC
GACGAGCCCA CCGGCAACCT GGACCGCAGC ACCGCCAACG GGGTGTTTGA GTTGATGCTG
GAGCTGGCCC GTGTGCAAGG CACCGCCTTT GTGATGGTGA CCCACGATGA ATCATTGGCG
GAGCGGTGCT CGCGCCGGAT CAGGCTGGTT CAGGGACGAC TGCTGGAAGC GTTCTAG
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| Protein sequence | MTPTLAASRA ALPPEGAAIG LGRPGTDGDI PMGDIVLSAR AITKRFTEGR LDVTVLQGVD
LDVRAGETLA IVGASGSGKS TLLHLMGGLD APTSGSVFLH GQDLAHQSAA AQGRLRNQYL
GFVYQFHHLL PEFSALDNVA MPLWIRRLAP AESTHTATEM LAKVGLQERL AHRPSELSGG
ERQRVAIARA LVTRPACVLA DEPTGNLDRS TANGVFELML ELARVQGTAF VMVTHDESLA
ERCSRRIRLV QGRLLEAF
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