| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3230 |
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| Symbol | |
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| ID | 3962870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3578039 |
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| End bp | 3579241 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918049 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_524470 |
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| Protein GI | 89901999 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.293864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC AATGGCACAA AAAATGGATG GGCCTCATGG TCTTGTCTGG CGCTCTGGGC
AGCGCGCTGG CCCAGCCGGC CAATCCCCTG CGCATCGGCT TGATTGGCCC GCTCACCGGG
CCTTCGGCGG ATTTTGGCGT GCCCATGATG AATGGCGCCA AGCTGGCATT GGATGAAATC
AATGCCGCCG GTGGTTACCT GGGGCGGCCG CTGGAGCTGG TGATCAAGGA TGACGCCGGC
ACGCCAGATG TCGGCTTGCA GCGATCCAGA GAGTTCCTTA AGGATCAGTT GATCGCCACC
ATCGGCTTTT GCAATACGGG CGTGGCCCTG AAGTCGCTGG AGGTGTTCCA GAGCGCCAAG
ATACCCTTGA TCGTGCCCTG CGCCACCGGG ACCCCCATCA CCACCACATA TCCGGCACCC
GACAGCTATG TTTTCAGGAC GTCGGCGCGC GACGCCATTC AGGCACCGTT CGTGGTCGAC
GATATCGTCG CACGTGGCTG GACCCGGGTG GCGGTGTTTG CCGACAACAC CGGCTATGGC
GAGGCGGGCT TGCAGGACGT GCTGAAGGCG CTGGCGGCCA AGAATCTCAA GCCGGTGCAT
GTGGCCCGGT TTGAGCTCGG CGTGAAAGAC CTGCAAACCG AACTCAAGGC GGCGCAGGCG
GCCGGTGCCG ATGTGATTTT CAGCTACACG GTCGGGCAAG AGAATGCCGT GATTGCCCGC
GGGCGCCAAG CCCTGGGCTG GAAGGTGCCC CAAGTCGGGG CCTGGCCCTT GTCGTTTCCA
TTTTTCATCG ACGGCGCAAG GGAAGCCGCC GAAGGGGCGC TGATGGCGCA GACCTTTATT
GCCGAGCCGA GCAACGAGCG GCGCAGTGCG TTTCTCAGCG CTTACGCGCG TAAATACAAG
ACGACCAAGA TCACGGTGCC GATGGCGGCG GTGCAAGCCT ATGACTCGGT CTATCTGCTC
ACCTACGCTA TTTTGGCGAT CCGCAATGGC GACCTCTCGG GCCCCTCGGT CAAAGCCGCG
CTGGAGACCA TGCCGCGCAT CTACTACGGT GTTGCCGCCA CCCACGAGCA TCCGTTCAGC
AAGGATGACA AGGACGCCAT CAGTATCAAT ATGCTGGTGA TGGGCATGGT GAAAAACGGC
GCTGTGACCT TCGCCTATCC GCAGGACCGG ACCCGCAACC TGATTGTGAA GCGCAAGCGT
TGA
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| Protein sequence | MNKQWHKKWM GLMVLSGALG SALAQPANPL RIGLIGPLTG PSADFGVPMM NGAKLALDEI
NAAGGYLGRP LELVIKDDAG TPDVGLQRSR EFLKDQLIAT IGFCNTGVAL KSLEVFQSAK
IPLIVPCATG TPITTTYPAP DSYVFRTSAR DAIQAPFVVD DIVARGWTRV AVFADNTGYG
EAGLQDVLKA LAAKNLKPVH VARFELGVKD LQTELKAAQA AGADVIFSYT VGQENAVIAR
GRQALGWKVP QVGAWPLSFP FFIDGAREAA EGALMAQTFI AEPSNERRSA FLSAYARKYK
TTKITVPMAA VQAYDSVYLL TYAILAIRNG DLSGPSVKAA LETMPRIYYG VAATHEHPFS
KDDKDAISIN MLVMGMVKNG AVTFAYPQDR TRNLIVKRKR
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