Gene Rfer_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3227 
Symbol 
ID3962867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3574393 
End bp3574998 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content55% 
IMG OID637918046 
Producttranscriptional regulator 
Protein accessionYP_524467 
Protein GI89901996 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.792428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATC AATCCGAACC GAGTAGCAGT GAGGCTTTGC TGGGGCAACG CATACGGGCC 
CAGCGCAGCC AGCTTGGCTG GACCTTGGAG CAGACCAGTC AGGCGACCGG TCTGGCGCGA 
TCCACGCTGT CCAAAATTGA GAACGGCCTG ATGTCGCCCA CCTATGACGC GTTGATCAAA 
TTGGCCACGG GTTTACAAAT CGACATCAGC GAGTTGTTTG AGCCGAACAA AAATATTTCA 
GGCAGTGGAC GACGCAGCAT CACGCGCAAG GGCTCCGGCC AGAGTCACCA CACGCCTTAC 
TACGACCACA CCCTGCTGTG CAATGACATG TCGAACAAAG ACATGATTCC ATTCAAGACC 
CGAATCCTGG CACGCTCGTT TGACGATTTT GAAGACTGGA GCCGTCATAC GGGGGAAGAG 
TTTGTTTATG TGCTGGCCGG TGACGTGGAA CTTTTCACCG AGTTTTACGA GCCCGTGTAT 
CTGGGGCCGG GCGACTCCTG GTACATCGAC AGCCGCATGG GGCACCGCGT GATCAGCGTC 
AGTGCAGAGG ATGCAGAAGT CTTGTGGGTC AGCACCACCC ACCCACGCAC GACGAAAAAA 
ATATGA
 
Protein sequence
MNDQSEPSSS EALLGQRIRA QRSQLGWTLE QTSQATGLAR STLSKIENGL MSPTYDALIK 
LATGLQIDIS ELFEPNKNIS GSGRRSITRK GSGQSHHTPY YDHTLLCNDM SNKDMIPFKT 
RILARSFDDF EDWSRHTGEE FVYVLAGDVE LFTEFYEPVY LGPGDSWYID SRMGHRVISV 
SAEDAEVLWV STTHPRTTKK I