| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3225 |
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| Symbol | |
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| ID | 3962865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3572551 |
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| End bp | 3573423 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918044 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_524465 |
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| Protein GI | 89901994 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCT CCCTGCCCCG CCCGCTTTGG TTGCGCGCCA GCACCGTGGT CTACGGACTG
CTGTTTTTTG CCTTTTTGTT TCTGCCGCTG GTGGTCGTGG CGGTATTCGC CTTCAACGAC
GCAGCCTACC CGGCGCCGCC GTGGCGCGGC TTCACGCTGG ACTGGTTTTT GGGTGGTGCC
GATACGGCGC GCCGCGGCTT GTTTGCCGAC AGCGCCATGC TGGGCAGCCT GTGGACCAGT
GTGGTGGTGG CGTGCTGGGT GACCGTGCTC TCGGTCTTGG TCGGCACGGC CAACGCGTTT
CTGATTGAGC GCACGCAGTT TCGGGGCAAA CAGGCTTTGT CATTGTTGAT GCTGGCGCCG
CTGGTGATTC CGGGCGTGAT TCTGGGCATC TCGATCCTGG CTTTTGCCAG CCGCATTGCC
AATCTGGCCG ATGACCTGTG GGCGCTGGAG CTGAATTTTT TGCGCCCCGG CCTGCCACTG
GTGGTGTTGG GGCAGTTCTC GTACATCGTG TCCATTGCCA CGCTGACCAT CACGGCGCGG
CTCAAGCGCT TTGATGTCAC GCTGGAAGAG GCCGCCTACA ACCTGGGCGC CTCACGCGCA
GCGGTGTTTA CCACCATCAC CCTGCCCTAT CTGCAACCCG CGCTGATTGG CGCGGCCGCT
ATTTCATTTT TGATGTCGTT CGAGAACTTC AACACCACGC TCATGCTGGT GGGGTCGGAC
GCGCCCTTGA CCGTGATGAT GTATGGACGC ATGCGCGAAG GTGCGACCCC GGTGCTCAAC
GCGGTGAGTC TGTTTTTGAT GGTGGCTTCT GCCCTGTTGG CACTGACGTT GTTGCGGGGT
AAGCCATCAG CGCAGGGGCC GGCAGCGGTG TGA
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| Protein sequence | MIASLPRPLW LRASTVVYGL LFFAFLFLPL VVVAVFAFND AAYPAPPWRG FTLDWFLGGA
DTARRGLFAD SAMLGSLWTS VVVACWVTVL SVLVGTANAF LIERTQFRGK QALSLLMLAP
LVIPGVILGI SILAFASRIA NLADDLWALE LNFLRPGLPL VVLGQFSYIV SIATLTITAR
LKRFDVTLEE AAYNLGASRA AVFTTITLPY LQPALIGAAA ISFLMSFENF NTTLMLVGSD
APLTVMMYGR MREGATPVLN AVSLFLMVAS ALLALTLLRG KPSAQGPAAV
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