| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3221 |
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| Symbol | |
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| ID | 3962861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3568431 |
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| End bp | 3569282 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918040 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_524461 |
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| Protein GI | 89901990 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTT GGATCGACAC CCATTGCCAC CTGGATGCAC AAAAGTCTAG GCCTCTAGCC
CAGGCAGTGC GGGCGCGGGC TGCTATTAAT AGCGTAGCTC ATTGTGTGTT GCCCGCCGTC
GAGCTTGGCA ACTTTGATGT CGTGCGGGAG CTGGCGCACA CAACCGGTGA CAGCTATGCA
CTGGGCATTC ACCCTTTGTG TGTCAAGCCG GCGTTGGACG CTCATCTGAG CCGCCTGGAC
GCCACGTTGA TGCAGCACCG GGATGACCCG CGCCTGGTGG CCGTCGGTGA AATAGGGCTG
GATTTCTTTC TGCCGGAGTT GTGTGTCAGC CCGCTGCGCG AGCGCCAGGA ATATTTTTTT
CTGGCACAGC TCAGGTTGGC GCAAAAGTAC GACTTGCCGG TGATATTGCA TACACGCCGC
TCGGTGGACC GGGTGCTCAA AGGCTTGCGC GAGGTCGCTG GCGCTCGCGG GCAGTGGCAT
GGCATTGCCC ACGCCTTCAA TGGCAGCGAG CAGCAGGCCC ACGCCTTCAT GGCACTGGGC
TTCAAGCTCG GCTTTGGCGG TGCATTGACT TATGAACGTG CGCTGCAGTT GCGACGCCTG
GCGATCAGCC TGCCCCTAGA CGCCATCGTG ATGGAAACCG ATGCGCCCGA CATGCCGCCG
CACTGGTTGT ACAAAACGGC TGAGCAGCGC GCCGCGGGTG CAGCGCAGGG CCGCAATGAG
CCCGGCGAGT TGCCGCGCAT AGGGGCTGAA TTGGCGGCGC TACGCGGCAT CAGTGCTGAC
GAATTGGCTG AGGCGACGAC GCGCAACGCG CTGGTGGCTC TGCCGCGGCT GCGCGCCTTA
TTGCCGCTTT AA
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| Protein sequence | MTIWIDTHCH LDAQKSRPLA QAVRARAAIN SVAHCVLPAV ELGNFDVVRE LAHTTGDSYA
LGIHPLCVKP ALDAHLSRLD ATLMQHRDDP RLVAVGEIGL DFFLPELCVS PLRERQEYFF
LAQLRLAQKY DLPVILHTRR SVDRVLKGLR EVAGARGQWH GIAHAFNGSE QQAHAFMALG
FKLGFGGALT YERALQLRRL AISLPLDAIV METDAPDMPP HWLYKTAEQR AAGAAQGRNE
PGELPRIGAE LAALRGISAD ELAEATTRNA LVALPRLRAL LPL
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