Gene Rfer_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3218 
Symbol 
ID3962858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3565494 
End bp3566339 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content56% 
IMG OID637918037 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_524458 
Protein GI89901987 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACG CTTTTGATTA CGAAACATCG GTCACCCGAA ATAGCGGCTA CATCTCGGCC 
GAGACGCAAG CAAAGATAAG AAAGACCAGA CTACTGATCG CTGGCTGCGG AATTGGCAGC
AGCCCCGCAG TTTGTGCAGC CCGCATGGGC TTCGAAAATT TTGTCTTGGT GGACGGCGAT
GTGGTCGACG CGCACAACCT GAATCGCCAG TTCTACGACT TTGCCGATAT TGGCAAGCCC
AAGGTCGCGG CGCTGAAAGA CAAGATCCTG AGAATCAACC CAGAGGCCAA GGTAGAGGCC
ATTGAGGCCT ATCTGGATGC AGACAACACG CAAGAGATTG TTGGCAAGGC AGATATCGTT
TTTGATACGG TTGACTTCCT TGACTTGCCA GCGATCCTGC GCTTGCACGA CAGTGCGAAG
AAACACAAGG CACACATTTT TACAGCCTTG AGCGTGGGCT TTGGCGCATT GGTCTGGTAT
TTCCCGGCGG GTTCCAGCCT GACATTGACC GACATCCTGG CCCCGGACAT CGCGGGGTCA
AGCGCGGGTG GTACTGTCCC GAGCTACGCC GACGTTTTCG CATCGTTCAT ACAGCGCCTT
GCGCCACATC TCGATGCCGA GGTCGTCGAG CAGGTCAGCA AGGTACTCAC CATGATGAAG
GATGGCAAGC CCTGCCCGGC CTCGCAAGTT GCCGTCGGCA GCTTTGCGAT CGGCGCCATG
GCCATGTCCA TGATGCACGA CTTGCTGGCG GGCAATCCCA TACCCTCGGC CCCCAAATTG
GTCCTCCACA GCTTCAGGAG TTATCAGACC CAGATAGTGG ATGTATCGAC CAGCCAGCCG
GACTGA
 
Protein sequence
MTNAFDYETS VTRNSGYISA ETQAKIRKTR LLIAGCGIGS SPAVCAARMG FENFVLVDGD 
VVDAHNLNRQ FYDFADIGKP KVAALKDKIL RINPEAKVEA IEAYLDADNT QEIVGKADIV
FDTVDFLDLP AILRLHDSAK KHKAHIFTAL SVGFGALVWY FPAGSSLTLT DILAPDIAGS
SAGGTVPSYA DVFASFIQRL APHLDAEVVE QVSKVLTMMK DGKPCPASQV AVGSFAIGAM
AMSMMHDLLA GNPIPSAPKL VLHSFRSYQT QIVDVSTSQP D