| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3214 |
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| Symbol | |
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| ID | 3961190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3561192 |
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| End bp | 3562979 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918033 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_524454 |
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| Protein GI | 89901983 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCG CCGCAGCATC CAGGACCCGC CACCCGGCCC ATGCCGGCCC GCTGGATTGG
CGCAGCCTGG TGCTCTGGTT GCACGGCGAC GGCGTCATTA GCACCGAAGA AGCGCAGCGC
ATCAACGCGC GCTGCGCCCA GGCCGAGAGT GTGCAGCACC CCCTGGTGCG CCTGGCCAGT
GTGTCGGTGC GTCGTGCCAG TGATGGCAAG CCGCTGGACA TTGAGCTGTT GACCCAATGG
CTGGCCGGGC GCGCCGGCCT GGACTATTTG CGCATCGACC CGCTCAAGGT CGATGTGGGC
AAAGTGGCCG ACACCATGAG TGCGGCCTAT GCCGAGCGCC ACAAGATTTT GCCGGTGCAA
GTTACCCCGA GTGAAATTGT GGTGGCCACC GCCGAACCTT TCATGACGGA TTGGGTGGCT
GAAGTGGAGC GGCAGTCGCG CCGCAGCGTG CGCCGGGTGG TGGCCAGCCC GCAGGACATT
CACCGTTACA CCGCAGAATT TTTTGCGCTG GCCAAGTCGG TGCGTGCCGC CAACAAGGCC
GGTGGCAACG CCGGGGGTGC CAGTTTTGAG CAGTTGGTGG AACTGGGCAA GACCAACAAA
CAGCTTGATG CCAACGACCA GAGTGTCGTG CAGGTGGTGG ACTGGCTCTG GCAATATGCG
TTTGACCAGC GCGCCAGCGA CATTCACCTG GAGCCGCGGC GCGAGCAGGG CGTGATCCGC
TTTCGCATTG ACGGTGTGTT GCACCCGGTG TACCAGATGC CGATGGGCGT GCTTACCGCC
ATGACGGCGC GCATCAAGTT GCTGGGCCGC ATGGACGTGG TGGAACGCCG CCGTCCGCAA
GACGGCCGCA TCAAGACCCG CAATCCGCGC GGCGATGAAA TCGAGATGCG GATTTCGACG
CTGCCCACCG CTTTTGGCGA GAAGATGGTG ATGCGGATCT TCGACCCGGA CACCACCGTC
AAGGACCTCG ATGCCCTGGG TTTCTCAGTC CACGATGCGC AGCGCTGGGA GGCTTTGGTC
AAGCGGCCGA ACGGCATCAT TCTGGTCACC GGACCCACCG GGTCGGGCAA GACCACGACC
CTGTATTCGA CCCTGAAACG GATCGCCACT GAGGAGGTGA ACGTCAGCAC GGTGGAAGAC
CCGATCGAAA TGATTGAGCC TTCGTTCAAC CAGACCCAGG TGCAGCTGCA GCTCGATTTT
GGTTTTCCGG AAGGCCTGCG CGCCCTGATG CGGCAAGATC CCGACATCAT CATGGTCGGT
GAGATCCGCG ACAGCCAGAC CGCCGAGATG GCGGTGCAGG CCGCGCTCAC CGGCCATCTG
GTGTTCTCCA CCTTGCACAC CAACGACGCG CCGTCAGCGG TGACGCGCTT GATGGAACTG
GGTGTGCCGT CCTACCTGAT CACTGCCACG CTGCTGGGTG TGCTGGCGCA GCGCCTGGTG
CGCACCTTGT GCCCGCATTG CAAGGTGCCC GACCCAGCGG CGACGCGCGA GGCACTGGCC
GGTGTGGTCA AGCCGTGGCA GATCAACGGC GGCTACAAAC CGTTCAAGCC GGTCGGCTGT
GTCGATTGCC GCATGACCGG CTTCATGGGC CGCATGGGCC TGTATGAGTT GCTGGTCGTC
GGTGAAGCCT TCAAGGAAAA AATAACCCGG GAGCCCAACG CCGATGCACT CAAGCGCCAG
GCCGTGCTTG ATGGCATGCG CCCGCTGCGG CTGGCCGGTG CCTTGCGTGT GGCCGAAGGT
TTGACGGTGC TGGAAGAAGT CCTCTCCAGC ACGCCACCGT TAACCTGA
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| Protein sequence | MNSAAASRTR HPAHAGPLDW RSLVLWLHGD GVISTEEAQR INARCAQAES VQHPLVRLAS
VSVRRASDGK PLDIELLTQW LAGRAGLDYL RIDPLKVDVG KVADTMSAAY AERHKILPVQ
VTPSEIVVAT AEPFMTDWVA EVERQSRRSV RRVVASPQDI HRYTAEFFAL AKSVRAANKA
GGNAGGASFE QLVELGKTNK QLDANDQSVV QVVDWLWQYA FDQRASDIHL EPRREQGVIR
FRIDGVLHPV YQMPMGVLTA MTARIKLLGR MDVVERRRPQ DGRIKTRNPR GDEIEMRIST
LPTAFGEKMV MRIFDPDTTV KDLDALGFSV HDAQRWEALV KRPNGIILVT GPTGSGKTTT
LYSTLKRIAT EEVNVSTVED PIEMIEPSFN QTQVQLQLDF GFPEGLRALM RQDPDIIMVG
EIRDSQTAEM AVQAALTGHL VFSTLHTNDA PSAVTRLMEL GVPSYLITAT LLGVLAQRLV
RTLCPHCKVP DPAATREALA GVVKPWQING GYKPFKPVGC VDCRMTGFMG RMGLYELLVV
GEAFKEKITR EPNADALKRQ AVLDGMRPLR LAGALRVAEG LTVLEEVLSS TPPLT
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