Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3208 |
Symbol | |
ID | 3961184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3548554 |
End bp | 3551397 |
Gene Length | 2844 bp |
Protein Length | 947 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637918027 |
Product | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase |
Protein accession | YP_524448 |
Protein GI | 89901977 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.950859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACCG AGAGCCTGAG CCCAGCCAGC GGCGACGAGC TGGGCCGCTA CGTCAGCGCG AGCCGCACGC TCGATGCCAC GCGCTCGCAG ATCGACGCCC TGGAGCAGAC CGAAGCGGTG GAGACCTTCC ATCGCCAGTT GGCGTTGTTG CGCCGGCGCC TGCTGAGCGA GCCGCAGGCC TTTCGCGACA TCTTTATTGC TGACGGCACC GAAGCCATGG TCTGGGAGTT TCAGCAAGAC GAGCTGGGGC CCGATTTCAT CCGCACCCTG TGGGCCTTGA TGCTGCGTGA CGACGACACC AGCAAAGTGC TGATGCGCTT TGTCTGGAAC GTGCCGCTCA AACTCAAACG CAAGTTTGTG CGCGCCATCG ACACCCATTT GTCAGAGCGC TACCCGATGT TCAAGGGCCT GTCGCAAAAC TGGCCGGCGG AAAACTTCAT CCCGCCCTCT ATGCGCGATC CGCTGGAGAG GTCCCAGGAC TTCGGCCTGG TCAACCAGGG TTACCTGGGT TACATGAGCC AGGGCTACAG CGCGCGCGAG GTGGAGATGT TTGTGTGGCT GGAAGCGCTG CGCGACAAGC AGTGCGAAGA CAAGCCGTGC GAGCTGGGTC TGCGTGTCGC AGGCCAAGCC GAGCCCAAGG GCGGCTGTCC GGTCAAGATC CATATCCCGG AAATGCTCGA ATTGCTCGGC ACCGGGCGCT TTCGCGAAGC GATGGAATTG ATAGAGAACT GCAACCCCTT GCCCAATGTG ACCGGGCGCG TCTGCCCGCA GGAGTTGCAG TGCCAGGGCG TCTGCACGCA CCAGAAGCGG CCGATCGAGA TTGGCCAGAT CGAGTGGTAT CTGCCGCAAC GCGAAAAGCT GGTCAATGCC GAGGGCATTG CGGCGCGCTT TGCCAATATT CCCGACCCTT GGGCCAAGGC CGACAAGCCG CCCGTGGCGG TGGTGGGCTC AGGCCCGGCC GGGCTGATCA ACGCTTACCT GCTGGCCTCC GAGGGTTTCC CGGTGACGGT GTTCGAGGCC TTTCATGCCC TGGGCGGCGT GCTGCGCTAC GGCATTCCCG AGTTCCGCCT GCCCAACGAC CTGATCGACG ATGTGGTCGG CAAAATCAAA TTACTCGGCG GCAAGTTTGT CGCCAACTTT GTGGTCGGTA AAACAGCGAC GCTGGAGGAC CTGAAACAAG CCGGCTTCTG GAAGATATTT GTCGGCACCG GTGCGGGTTT GCCGCGCTTC ATGAATGTGC CCGGTGAGCA CTTGCTCAAC GTCATGTCGG CCAACGAGTT CCTGACGCGC GTGAACCTGA TGCAGGGTCT GCACGCGGAC TACGAGACTC CCCTGCCCGA GACACGCGGC AAACGCATCA TGGTCATTGG GGGCGGCAAC ACGGCGATGG ATGCCGCGCG CACCGCCCGC CGCCTGGGCG GGCTGGTCAC CATCGTCTAT CGCCGCACCC AGGCCGAGAT GCCGGTGCGG GTCGAGGAGT TGCACCACGC GTTTGAGGAA GGCATTGAGC TCAAGGAATT ACGGGCGCCG CGCGAATTCA TCGGCGACGA CAAGACCCAT TTTGTGACCC ACAGCCTGCT CGATGTGATC GCGCTGGGCG CGCCCGATGC CTCCGGCCGG CGCAGTCCGG TGAGCACCGG CGAGACCGAA TCGATGACGG TGGACCTGGT CATCATGGCG CTGGGCAACA CACCCAACCC GATCATCAAA GACTCCGAGC CCAGCCTCAA GACGACCAAG TGGGGCACCA TCGATGTGGC GCCGGGTTCG CAGCAGACCT CGCTGCCCGG CGTTTATTCG GGTGGCGATG CGGCGCGTGG CGGCTCCACG GCCATCCGCG CCGCCGGCGA CGGCCAGGCC GCGGCGCGCG AGATTGTGGG CGACATCAAC CTGACGGCGC ACGAGATCAC TGCCATGGTC AGGAACGCCG CGCACTACAC CGAGATGGGT GCTGCGCCGC AGACGATTCT GCAGAAGATT CATTTGGCCG ATGGCATCGT CGAGTTCATC GTGCATTCGC CCCTGGTCGC CAAGGCGGCC CAGGCTGGCC AATTCGTGCG CGTGTTGCCC TGGGAAAAGG GCGAACTCAT TCCGCTCACG CTGGCCGACT GGGATGCCAA AGCCGGCACC ATTTGCCTGG TGGTGCAGGC CATGGGCGCG AGCAGCATCG CCATCAACGC CATGTTGGTG GGCGATGCCT TTACCGGTAT CGCCGGCCCG CTGGGCCTGC CCAGTGAACT GCACCGTTTT GAGGGCCAGC AGACGGTGGT GTTTACCGCA GGTGGCCTGG GTTTGCCGCC CGTTTACCCC ATCATGCGCG CGCACCTGCG CCTGGGCAAC CACGTCACGC TGATTGCGGG CTTCCGCAAT GCCGACTTGC TGTTCTGGGT CAAGGCGGGT GAACGCGTGA GCCAACTGCA AGCCGAGTTC CCCGATTTGC TCGACGTGAT CTACACCAGC AACGACGGCA GCTTCTGTCA AAAGGGTTTT GTCACCACGC CGCTTGAAGC CATGCTCAAG GATGGTCAGA CCAGCCAGGG CCGCAAAATT GCCGAAGTCG TGACGATTGG CCCGCCGCTG ATGATGCGTG CCGTGAGCGA TCTGACCAAA CCCTATGGCG TCAAGACGGT TGCCAGCCTG AACTCGATCA TGGTCGACGC CACCGGCATG TGCGGCGCCT GCATGGTGCC GGTGACGATT GACGGCAAGA TGGTGCGCAA GCACGCCTGT GTTGACGGCC CCGAGCTCGA CAGCCACATC ATCGACTGGG ACAAGTTTTT GCCGCGCTTC AACCAGTTCA AGCCGCAGGA GCAGGCGAGC CGGGTCACGC ACGGGTTCGC CTGA
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Protein sequence | MSTESLSPAS GDELGRYVSA SRTLDATRSQ IDALEQTEAV ETFHRQLALL RRRLLSEPQA FRDIFIADGT EAMVWEFQQD ELGPDFIRTL WALMLRDDDT SKVLMRFVWN VPLKLKRKFV RAIDTHLSER YPMFKGLSQN WPAENFIPPS MRDPLERSQD FGLVNQGYLG YMSQGYSARE VEMFVWLEAL RDKQCEDKPC ELGLRVAGQA EPKGGCPVKI HIPEMLELLG TGRFREAMEL IENCNPLPNV TGRVCPQELQ CQGVCTHQKR PIEIGQIEWY LPQREKLVNA EGIAARFANI PDPWAKADKP PVAVVGSGPA GLINAYLLAS EGFPVTVFEA FHALGGVLRY GIPEFRLPND LIDDVVGKIK LLGGKFVANF VVGKTATLED LKQAGFWKIF VGTGAGLPRF MNVPGEHLLN VMSANEFLTR VNLMQGLHAD YETPLPETRG KRIMVIGGGN TAMDAARTAR RLGGLVTIVY RRTQAEMPVR VEELHHAFEE GIELKELRAP REFIGDDKTH FVTHSLLDVI ALGAPDASGR RSPVSTGETE SMTVDLVIMA LGNTPNPIIK DSEPSLKTTK WGTIDVAPGS QQTSLPGVYS GGDAARGGST AIRAAGDGQA AAREIVGDIN LTAHEITAMV RNAAHYTEMG AAPQTILQKI HLADGIVEFI VHSPLVAKAA QAGQFVRVLP WEKGELIPLT LADWDAKAGT ICLVVQAMGA SSIAINAMLV GDAFTGIAGP LGLPSELHRF EGQQTVVFTA GGLGLPPVYP IMRAHLRLGN HVTLIAGFRN ADLLFWVKAG ERVSQLQAEF PDLLDVIYTS NDGSFCQKGF VTTPLEAMLK DGQTSQGRKI AEVVTIGPPL MMRAVSDLTK PYGVKTVASL NSIMVDATGM CGACMVPVTI DGKMVRKHAC VDGPELDSHI IDWDKFLPRF NQFKPQEQAS RVTHGFA
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