Gene Rfer_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3208 
Symbol 
ID3961184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3548554 
End bp3551397 
Gene Length2844 bp 
Protein Length947 aa 
Translation table11 
GC content63% 
IMG OID637918027 
Productputative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase 
Protein accessionYP_524448 
Protein GI89901977 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID[TIGR01316] glutamate synthase (NADPH), homotetrameric 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.950859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACCG AGAGCCTGAG CCCAGCCAGC GGCGACGAGC TGGGCCGCTA CGTCAGCGCG 
AGCCGCACGC TCGATGCCAC GCGCTCGCAG ATCGACGCCC TGGAGCAGAC CGAAGCGGTG
GAGACCTTCC ATCGCCAGTT GGCGTTGTTG CGCCGGCGCC TGCTGAGCGA GCCGCAGGCC
TTTCGCGACA TCTTTATTGC TGACGGCACC GAAGCCATGG TCTGGGAGTT TCAGCAAGAC
GAGCTGGGGC CCGATTTCAT CCGCACCCTG TGGGCCTTGA TGCTGCGTGA CGACGACACC
AGCAAAGTGC TGATGCGCTT TGTCTGGAAC GTGCCGCTCA AACTCAAACG CAAGTTTGTG
CGCGCCATCG ACACCCATTT GTCAGAGCGC TACCCGATGT TCAAGGGCCT GTCGCAAAAC
TGGCCGGCGG AAAACTTCAT CCCGCCCTCT ATGCGCGATC CGCTGGAGAG GTCCCAGGAC
TTCGGCCTGG TCAACCAGGG TTACCTGGGT TACATGAGCC AGGGCTACAG CGCGCGCGAG
GTGGAGATGT TTGTGTGGCT GGAAGCGCTG CGCGACAAGC AGTGCGAAGA CAAGCCGTGC
GAGCTGGGTC TGCGTGTCGC AGGCCAAGCC GAGCCCAAGG GCGGCTGTCC GGTCAAGATC
CATATCCCGG AAATGCTCGA ATTGCTCGGC ACCGGGCGCT TTCGCGAAGC GATGGAATTG
ATAGAGAACT GCAACCCCTT GCCCAATGTG ACCGGGCGCG TCTGCCCGCA GGAGTTGCAG
TGCCAGGGCG TCTGCACGCA CCAGAAGCGG CCGATCGAGA TTGGCCAGAT CGAGTGGTAT
CTGCCGCAAC GCGAAAAGCT GGTCAATGCC GAGGGCATTG CGGCGCGCTT TGCCAATATT
CCCGACCCTT GGGCCAAGGC CGACAAGCCG CCCGTGGCGG TGGTGGGCTC AGGCCCGGCC
GGGCTGATCA ACGCTTACCT GCTGGCCTCC GAGGGTTTCC CGGTGACGGT GTTCGAGGCC
TTTCATGCCC TGGGCGGCGT GCTGCGCTAC GGCATTCCCG AGTTCCGCCT GCCCAACGAC
CTGATCGACG ATGTGGTCGG CAAAATCAAA TTACTCGGCG GCAAGTTTGT CGCCAACTTT
GTGGTCGGTA AAACAGCGAC GCTGGAGGAC CTGAAACAAG CCGGCTTCTG GAAGATATTT
GTCGGCACCG GTGCGGGTTT GCCGCGCTTC ATGAATGTGC CCGGTGAGCA CTTGCTCAAC
GTCATGTCGG CCAACGAGTT CCTGACGCGC GTGAACCTGA TGCAGGGTCT GCACGCGGAC
TACGAGACTC CCCTGCCCGA GACACGCGGC AAACGCATCA TGGTCATTGG GGGCGGCAAC
ACGGCGATGG ATGCCGCGCG CACCGCCCGC CGCCTGGGCG GGCTGGTCAC CATCGTCTAT
CGCCGCACCC AGGCCGAGAT GCCGGTGCGG GTCGAGGAGT TGCACCACGC GTTTGAGGAA
GGCATTGAGC TCAAGGAATT ACGGGCGCCG CGCGAATTCA TCGGCGACGA CAAGACCCAT
TTTGTGACCC ACAGCCTGCT CGATGTGATC GCGCTGGGCG CGCCCGATGC CTCCGGCCGG
CGCAGTCCGG TGAGCACCGG CGAGACCGAA TCGATGACGG TGGACCTGGT CATCATGGCG
CTGGGCAACA CACCCAACCC GATCATCAAA GACTCCGAGC CCAGCCTCAA GACGACCAAG
TGGGGCACCA TCGATGTGGC GCCGGGTTCG CAGCAGACCT CGCTGCCCGG CGTTTATTCG
GGTGGCGATG CGGCGCGTGG CGGCTCCACG GCCATCCGCG CCGCCGGCGA CGGCCAGGCC
GCGGCGCGCG AGATTGTGGG CGACATCAAC CTGACGGCGC ACGAGATCAC TGCCATGGTC
AGGAACGCCG CGCACTACAC CGAGATGGGT GCTGCGCCGC AGACGATTCT GCAGAAGATT
CATTTGGCCG ATGGCATCGT CGAGTTCATC GTGCATTCGC CCCTGGTCGC CAAGGCGGCC
CAGGCTGGCC AATTCGTGCG CGTGTTGCCC TGGGAAAAGG GCGAACTCAT TCCGCTCACG
CTGGCCGACT GGGATGCCAA AGCCGGCACC ATTTGCCTGG TGGTGCAGGC CATGGGCGCG
AGCAGCATCG CCATCAACGC CATGTTGGTG GGCGATGCCT TTACCGGTAT CGCCGGCCCG
CTGGGCCTGC CCAGTGAACT GCACCGTTTT GAGGGCCAGC AGACGGTGGT GTTTACCGCA
GGTGGCCTGG GTTTGCCGCC CGTTTACCCC ATCATGCGCG CGCACCTGCG CCTGGGCAAC
CACGTCACGC TGATTGCGGG CTTCCGCAAT GCCGACTTGC TGTTCTGGGT CAAGGCGGGT
GAACGCGTGA GCCAACTGCA AGCCGAGTTC CCCGATTTGC TCGACGTGAT CTACACCAGC
AACGACGGCA GCTTCTGTCA AAAGGGTTTT GTCACCACGC CGCTTGAAGC CATGCTCAAG
GATGGTCAGA CCAGCCAGGG CCGCAAAATT GCCGAAGTCG TGACGATTGG CCCGCCGCTG
ATGATGCGTG CCGTGAGCGA TCTGACCAAA CCCTATGGCG TCAAGACGGT TGCCAGCCTG
AACTCGATCA TGGTCGACGC CACCGGCATG TGCGGCGCCT GCATGGTGCC GGTGACGATT
GACGGCAAGA TGGTGCGCAA GCACGCCTGT GTTGACGGCC CCGAGCTCGA CAGCCACATC
ATCGACTGGG ACAAGTTTTT GCCGCGCTTC AACCAGTTCA AGCCGCAGGA GCAGGCGAGC
CGGGTCACGC ACGGGTTCGC CTGA
 
Protein sequence
MSTESLSPAS GDELGRYVSA SRTLDATRSQ IDALEQTEAV ETFHRQLALL RRRLLSEPQA 
FRDIFIADGT EAMVWEFQQD ELGPDFIRTL WALMLRDDDT SKVLMRFVWN VPLKLKRKFV
RAIDTHLSER YPMFKGLSQN WPAENFIPPS MRDPLERSQD FGLVNQGYLG YMSQGYSARE
VEMFVWLEAL RDKQCEDKPC ELGLRVAGQA EPKGGCPVKI HIPEMLELLG TGRFREAMEL
IENCNPLPNV TGRVCPQELQ CQGVCTHQKR PIEIGQIEWY LPQREKLVNA EGIAARFANI
PDPWAKADKP PVAVVGSGPA GLINAYLLAS EGFPVTVFEA FHALGGVLRY GIPEFRLPND
LIDDVVGKIK LLGGKFVANF VVGKTATLED LKQAGFWKIF VGTGAGLPRF MNVPGEHLLN
VMSANEFLTR VNLMQGLHAD YETPLPETRG KRIMVIGGGN TAMDAARTAR RLGGLVTIVY
RRTQAEMPVR VEELHHAFEE GIELKELRAP REFIGDDKTH FVTHSLLDVI ALGAPDASGR
RSPVSTGETE SMTVDLVIMA LGNTPNPIIK DSEPSLKTTK WGTIDVAPGS QQTSLPGVYS
GGDAARGGST AIRAAGDGQA AAREIVGDIN LTAHEITAMV RNAAHYTEMG AAPQTILQKI
HLADGIVEFI VHSPLVAKAA QAGQFVRVLP WEKGELIPLT LADWDAKAGT ICLVVQAMGA
SSIAINAMLV GDAFTGIAGP LGLPSELHRF EGQQTVVFTA GGLGLPPVYP IMRAHLRLGN
HVTLIAGFRN ADLLFWVKAG ERVSQLQAEF PDLLDVIYTS NDGSFCQKGF VTTPLEAMLK
DGQTSQGRKI AEVVTIGPPL MMRAVSDLTK PYGVKTVASL NSIMVDATGM CGACMVPVTI
DGKMVRKHAC VDGPELDSHI IDWDKFLPRF NQFKPQEQAS RVTHGFA