Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3199 |
Symbol | |
ID | 3961175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3540918 |
End bp | 3542870 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637918018 |
Product | nitrous-oxide reductase |
Protein accession | YP_524439 |
Protein GI | 89901968 |
COG category | [C] Energy production and conversion |
COG ID | [COG4263] Nitrous oxide reductase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.324425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACTC CCAACAATAA AATCGCGATC CCCAGGGATC TGGGTCGTCG CAATTTTCTC AACAAAACGG CAATTGCCGG CCTTGCCGGG GCTGGCTTGT CGGCCGGCCT GGTGGCCTGC AACAAGACGG CCGGTCCGGC TGCGACCGGC AGCCCGGCTG TAGCGGCTTC GGAGCCGGCC AAGAGTGGTG CTGTCGATTA CTCAGCCTAC GAGGTGCATC CCGGCCAACT CGATACTTAC TACTCCTTTT CTTCCGGCGG TCACTCGGGC GAAGTTCGTA TCTATGGCTT GCCCTCGGGC CGCTTGTTCA AGCGCATTCC GGTGTTCAAC ATTGACTGTC TCGTCGGCTG GGGTATCACC AACGAATCGA AGAAGATCAT GGGCACCAAC GCGGACGGCA GTCTGAAATA CTTCACGGGT GACACCCATC ATGTGCATCC GTCCTACACC GACGGAACCT ACAACGGCAA ACACCTTTTC GTCAATGACA AAATCCATGG TCGCATCGCG CGCGTGCGGC TCGATACCAT GGAGTGCGAC AAGATCACCG AATTGCCCAA CGTCCAGGGT TTCCACGGGA TTTTCCCGGA CAAGCGCGAT CCGGTTGACG AAAAGATCAA CTACACAACC CGCGTTTTTT GTGGCAACGA GTTCCACATT CCCCAGCCCA ACGACGGCCG CGACCTCAAC GACCCGACCA AGTATTTCTG CCTGTTCACG TGTATCGATG CGGAAACCCT GGAGCCGCGC TGGCAGGTCA AGGTAGACGG CAACATGGAT TTGGTGGCGA CCTCCTACGA CGGCAAACTG GCATGTTCCA ATCAATACAA CATGGAGAAT GGCGCCCATT ATGAGGACAT GATGTCGCTT GAGCGCGACT CCTGCATCTT CTTCAACATT GCCCGCATCG AGGCAGCTGT CAAGGCCGGA AAAACATTTT TCATCGGCAA ATCCAAGGTT CCGGTGGTGG ACGGCACCAA ATCCGCCAAC GCAGACCCGA AGACCGCGCT GACCTGCTAT GTGCCGACAC CAAAGAACCC GCACGGCGTC AACGCCAGCC CGGACGGCAA GTACTACGCC TGCTCCGGCA AGCTCTCGCC GACGGCCACC CTGATTGAGC ATGCTTTGGT ACTGAAATGG TTCGACGGTG AGCTCAAGGA GCCGCGCGAC ACCGTGGTCG CCGAACCTGA AATCGGTCTG GGCCCACTGC ACACCGGTTT CGACAACAAG GGCAACGCCT ATACGACGCT CTTCCTGGAC AGCCAGATCG TCAAATGGAA CCTCGAGGCC GCCATCAAAT CCTTCAAGGG TGATAAAGCG GCAAAGCCGG TGGTGGACCG CATCGACGTC CAATACCAGC CAGGCCACGG TTTTACGTCC ATGGGCGAGA CCAAGAATGC CGACGGCAAG TTCTTCCTGT CCGACAACAA GTTCTCCAAG GACCGCTTCC TGCCGGTTGG ACCGCTGCAC CCGGAAACCG CGCAACTGAT TGACATCAGC GGCGACAAGA TGAAGCTCGT GGCCGACCAC TCGGTGTACT CCGAGCCGCA TGACTCCATC ATCATTCCAC GCGAGCTGAT CAGGACCCGG CAGGTCTATG ACATCAACGA GTTCCCCAAC GCGGTCAAGG ATGCCAAGGA ATGTCGTGTC GAACGCAAAG GCAAGAAGGT GACGGTCTAC CTGACATCTC AGGCGCCAAC CTTCGGACTG CGCGAGTGGA CGGTCAAAAA GGGCGATGAG GTCACCATCA TCCTCACCAA CCTGGACAAG GTAGAGGATC TGACCCATGG CTTTGCCATC CCGAACTACA ACATCAACTT TATTGTCAAC CCCCAGGAGA CCAAATCAGT CACCTTCAAG GCCGACAAGC CCGGTGTCTA TTGGTGCTAC TGCACCAACT TCTGCCATGC ACTGCACCTT GAGATGCGTT CGCGCATGCT GGTGGAAGCC TGA
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Protein sequence | MNTPNNKIAI PRDLGRRNFL NKTAIAGLAG AGLSAGLVAC NKTAGPAATG SPAVAASEPA KSGAVDYSAY EVHPGQLDTY YSFSSGGHSG EVRIYGLPSG RLFKRIPVFN IDCLVGWGIT NESKKIMGTN ADGSLKYFTG DTHHVHPSYT DGTYNGKHLF VNDKIHGRIA RVRLDTMECD KITELPNVQG FHGIFPDKRD PVDEKINYTT RVFCGNEFHI PQPNDGRDLN DPTKYFCLFT CIDAETLEPR WQVKVDGNMD LVATSYDGKL ACSNQYNMEN GAHYEDMMSL ERDSCIFFNI ARIEAAVKAG KTFFIGKSKV PVVDGTKSAN ADPKTALTCY VPTPKNPHGV NASPDGKYYA CSGKLSPTAT LIEHALVLKW FDGELKEPRD TVVAEPEIGL GPLHTGFDNK GNAYTTLFLD SQIVKWNLEA AIKSFKGDKA AKPVVDRIDV QYQPGHGFTS MGETKNADGK FFLSDNKFSK DRFLPVGPLH PETAQLIDIS GDKMKLVADH SVYSEPHDSI IIPRELIRTR QVYDINEFPN AVKDAKECRV ERKGKKVTVY LTSQAPTFGL REWTVKKGDE VTIILTNLDK VEDLTHGFAI PNYNINFIVN PQETKSVTFK ADKPGVYWCY CTNFCHALHL EMRSRMLVEA
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