Gene Rfer_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3188 
Symbol 
ID3963058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3527503 
End bp3528369 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content61% 
IMG OID637918007 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_524428 
Protein GI89901957 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGCC GGTTTGGCAT TCTGGTCATG CATCTGCTGG GGCGTTTGCC GCTGGCGTGG 
GTGCGGGCGC TGGGCTACGG CCTGGGTTGG ACGCTGTACT TTCTGGCGCT GCCACGGCGG
CGGGTGGCCC AGACCAACTT GCGTTTGTGT TTTCCCGATC AGACTGCAAC GCAAATCCGG
CTGCTGGCGC GCCGCACTTT TGTCCATTTT GCCCAGGCCT GGCTGGACCG GGGCTGGCTT
TGGCATGGAA CGCCCGAGGT GACACGCCGG CGCCTGACCC TCATGGGCGC GGTGAGTGAA
CTGCACGGCA GTGAACCGGT GGTTATTTTT GCACCTCATT TTGTGGGCCT GGATGCGGGT
TGGACCGCGC TGACCCAGCA GCTGCCACGG CAATTCACCA CGATCTATAC CAATCAGGCC
AACAAAATTC TTGACGCCTG GATTCTCGCT GGCCGCCGGC GTTTTGGGTC TGCCAGGCTG
TTTGGACGGG TCGATGGCGT GAAAACCATC GTGGCGGCGT TACGCTCAGG CGATCCGCTG
TATTTGTTGC CGGACATGAA CTTTGGAGTG GAAGACTCCA TTTTTGTCCC GTTCTACGGC
ATTTCAGCCG CAACAGTGCC CTCCTTGGCG CGCTTTGCCA AACTGGGCCG CGCCAAGGTG
GTGCCGGTGG TGACCCGCAT GACGCACCAG GGCTACGAGG TTGAAGTGAT GCCGGCCTGG
CCGGGCTTTC CCTCCGACGA TGCGCTCGCC GATACGGCGC TCATGAACCA ACGGTTGCAG
TCTTACATAG ACAGCATGCC GGACCAGTAT TTCTGGGTGC ACAAGCGCTT CAAGGACCGC
CCGCCGGGCA TCCCGGCAGT TTACTGA
 
Protein sequence
MLSRFGILVM HLLGRLPLAW VRALGYGLGW TLYFLALPRR RVAQTNLRLC FPDQTATQIR 
LLARRTFVHF AQAWLDRGWL WHGTPEVTRR RLTLMGAVSE LHGSEPVVIF APHFVGLDAG
WTALTQQLPR QFTTIYTNQA NKILDAWILA GRRRFGSARL FGRVDGVKTI VAALRSGDPL
YLLPDMNFGV EDSIFVPFYG ISAATVPSLA RFAKLGRAKV VPVVTRMTHQ GYEVEVMPAW
PGFPSDDALA DTALMNQRLQ SYIDSMPDQY FWVHKRFKDR PPGIPAVY