Gene Rfer_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3182 
Symbol 
ID3963052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3518993 
End bp3520207 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content60% 
IMG OID637918001 
Productfatty acid desaturase 
Protein accessionYP_524422 
Protein GI89901951 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTAC CTGACTGGGC TGCCCTGGAT ACTCTGCTTG ACTGGCTGGC GCATGGATTT 
TGGCCGCTGA GCTGGTGGCA AATGGTGTTG TTCACTTTGG TCATGACGCA CGTCACCATG
ATCAGCGTGA CGGTGTTCTT GCATCGGCAT CAGGCGCACC GCGCGCTTGA TTTGCACCCG
GTGGCCGCCC ACTTTTTCAG ATTCTGGTTG TGGCTGACCA CGGGCCAGGT CACCAAAGAG
TGGACCTCCA TTCACCGCAA GCACCATGCC AAGTGCGAGC AGGCCGAAGA CCCGCACAGT
CCGCATGTCT ACGGCATCAA AACCGTGCTG CTGCAAGGTT ATGAGTTGTA CCGCAAAGAG
GCCGCCAACA AGGAAACCAT GACGCGTTAT GGTCATGGCA CGCCCAATGA CTGGCTGGAG
CGCAATCTGT ACAGCCGTTT TTCCTGGCAG GGTGTGAGCT TGATGCTGGT CATTGATCTG
GTCTTGTTTG GCGCCGCGGG CCTGGTCGTG TGGGCGGTGC AGATGGCCTG GACCCCGGTG
ATGGCCGCCG GCATCGTGAA TGGTGCGGCG CATTATTGGG GTTACCGCAA TTTTGAGGTG
ACCGATGCCA GCACCAACAT TTCACCCTGG GGCATCCTGA TTGCCGGTGA AGAGCTGCAC
AACAACCACC ATACCTACCC CACCTCGGCC AAGCTGTCGG TCAAGCCCTA CGAGTTTGAT
ATTGGCTGGG TGTACATCAG CCTGATGCAG CGCCTTGGCT TGGCCACCGT CAAGAAGACG
CCCCCGAAAC TGGCGCTGGG TGACATACGC CCGGTAGCGG ATGAAAAAAC CCTGGAGGCG
CTGATCTCCA ACCGTTATGA AATCATGGCC GCTTACGCCA AAGACATGCG TCGTGCCTTC
AAGGATGAGT TGCAGGCCCT GCAGGCGCGC CGCGCTGACG CTGCGGTCAT CAAAGCGGCC
AAGCGCTGGC TGCACCGTGA TGTGGACAAA GTACCGGCGG CTGCCGTGCC CCAGTTGGCC
TTGGCCCGGG CGGCTTCGCC GGTGCTCGAC AAAATGGTGC TGATGCGCGA AGAGTTGCGC
CAGATGTGGC TGAATCGCTC CCATACCCGC GAGCAATTGG CGGCTGATTT GCAAGCCTGG
TGCCACCAGG CCGAGGCCAG CGGCATTGTG GCTTTGCAGG CGTTCTCATT GCGGCTGCGG
GCGGCGCAGG CCTGA
 
Protein sequence
MLLPDWAALD TLLDWLAHGF WPLSWWQMVL FTLVMTHVTM ISVTVFLHRH QAHRALDLHP 
VAAHFFRFWL WLTTGQVTKE WTSIHRKHHA KCEQAEDPHS PHVYGIKTVL LQGYELYRKE
AANKETMTRY GHGTPNDWLE RNLYSRFSWQ GVSLMLVIDL VLFGAAGLVV WAVQMAWTPV
MAAGIVNGAA HYWGYRNFEV TDASTNISPW GILIAGEELH NNHHTYPTSA KLSVKPYEFD
IGWVYISLMQ RLGLATVKKT PPKLALGDIR PVADEKTLEA LISNRYEIMA AYAKDMRRAF
KDELQALQAR RADAAVIKAA KRWLHRDVDK VPAAAVPQLA LARAASPVLD KMVLMREELR
QMWLNRSHTR EQLAADLQAW CHQAEASGIV ALQAFSLRLR AAQA