Gene Rfer_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3173 
Symbol 
ID3962698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3509725 
End bp3510387 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID637917992 
Producthypothetical protein 
Protein accessionYP_524413 
Protein GI89901942 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATC GGTTTGAGCC CAAGGATCCG TCCCGACGCG TCAAGGCGGT GTTGATTGTG 
ATTGTGTTGC ACGTGTTGCT GGCTTACGTA TTGGTGTCGG GCCTGGCGCG CCAGGGGCTG
AGCGCCATCA ACAAACCGCT TGAAGCGGTG GTGATTCAGG AAGTCATCAT TCCGCCCTCA
CCCTCAACGC CGCCACCGCC ACCAATGCCG GCGCCGAAAG AAACAAGAAA ACCACAGGAG
GTGCTCAAGC GCGAAGCGCC TCCGCCACCC TCTATGCCGC CACCGGATGC AGCGCCCGAG
GCATCAAGTA CGGCGCCCGT CGTGGCGTCG GTCGCGTCTG CGCCCACAGC ACCGGCAGCG
GTCTCAGCGT TGCCGCCGGC GCCATCCCCA GTGGGGCCAC CCGGCCCGAA GCGCACCAGC
ATTGGCCTGG CTTGTCCGAC GCAGGTGCCG CCAGAGATGC CGCGCAAGGC ACTACAAGAG
GGCATTGAGG GCGTGGTCAA AGCGCAAATT CATGTCAAGG ACGGCACCAT TTTGGACGTC
ACGATTTTGT CCGGCCCGCG TGTGTTCCAT GCCGCCGTCA AAGCCGCCAT GTTGCAGTAC
AGATGTGTCA CTGATGGGGG CGAGGTCACG GCCACGCAGG AGTTCACCTT CAGGTTGGAG
TAG
 
Protein sequence
MDDRFEPKDP SRRVKAVLIV IVLHVLLAYV LVSGLARQGL SAINKPLEAV VIQEVIIPPS 
PSTPPPPPMP APKETRKPQE VLKREAPPPP SMPPPDAAPE ASSTAPVVAS VASAPTAPAA
VSALPPAPSP VGPPGPKRTS IGLACPTQVP PEMPRKALQE GIEGVVKAQI HVKDGTILDV
TILSGPRVFH AAVKAAMLQY RCVTDGGEVT ATQEFTFRLE