Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3173 |
Symbol | |
ID | 3962698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3509725 |
End bp | 3510387 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637917992 |
Product | hypothetical protein |
Protein accession | YP_524413 |
Protein GI | 89901942 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGATC GGTTTGAGCC CAAGGATCCG TCCCGACGCG TCAAGGCGGT GTTGATTGTG ATTGTGTTGC ACGTGTTGCT GGCTTACGTA TTGGTGTCGG GCCTGGCGCG CCAGGGGCTG AGCGCCATCA ACAAACCGCT TGAAGCGGTG GTGATTCAGG AAGTCATCAT TCCGCCCTCA CCCTCAACGC CGCCACCGCC ACCAATGCCG GCGCCGAAAG AAACAAGAAA ACCACAGGAG GTGCTCAAGC GCGAAGCGCC TCCGCCACCC TCTATGCCGC CACCGGATGC AGCGCCCGAG GCATCAAGTA CGGCGCCCGT CGTGGCGTCG GTCGCGTCTG CGCCCACAGC ACCGGCAGCG GTCTCAGCGT TGCCGCCGGC GCCATCCCCA GTGGGGCCAC CCGGCCCGAA GCGCACCAGC ATTGGCCTGG CTTGTCCGAC GCAGGTGCCG CCAGAGATGC CGCGCAAGGC ACTACAAGAG GGCATTGAGG GCGTGGTCAA AGCGCAAATT CATGTCAAGG ACGGCACCAT TTTGGACGTC ACGATTTTGT CCGGCCCGCG TGTGTTCCAT GCCGCCGTCA AAGCCGCCAT GTTGCAGTAC AGATGTGTCA CTGATGGGGG CGAGGTCACG GCCACGCAGG AGTTCACCTT CAGGTTGGAG TAG
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Protein sequence | MDDRFEPKDP SRRVKAVLIV IVLHVLLAYV LVSGLARQGL SAINKPLEAV VIQEVIIPPS PSTPPPPPMP APKETRKPQE VLKREAPPPP SMPPPDAAPE ASSTAPVVAS VASAPTAPAA VSALPPAPSP VGPPGPKRTS IGLACPTQVP PEMPRKALQE GIEGVVKAQI HVKDGTILDV TILSGPRVFH AAVKAAMLQY RCVTDGGEVT ATQEFTFRLE
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