| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3172 |
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| Symbol | |
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| ID | 3962697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3508476 |
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| End bp | 3509405 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917991 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_524412 |
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| Protein GI | 89901941 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.538875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACCT TCATACAGCA GATCATCAAT GGTCTGGTGT TGGGCAGCAT GTATGCCTTG
GTGGCGCTGG GCTACACCAT GGTCTACGGC ATCATCGGCC TGATCAACTT TGCGCACGGC
GAGGTACTGA TGGTTGGCGC CCTCACCAGT TGGACCATCA TTGGCTGGAT GCAGGAGGCC
ATGCCCGGCA CGCCGGGATG GTTGATTCTG CTGATCTCCC TGATCATTGC CTGTGTGGTG
TCGGCGACGC TCAATTTTGT GATTGAAAAG GTGGCGTATC GGCCACTTCG GGACAGCCCC
CGGCTGGCGC CCCTGATCAC GGCCATCGGC ATGTCGCTGT TGCTGCAGAC CTTGGCCATG
ATCATCTGGA AGCCCAATTA CAAACCCTAC CCGACCTTGT TGCCGCGTAC ACCGTTCGAG
ATCGGCGGCG CGGTGATTAC GCCGACCCAG GTGCTGATTC TGGGCATGAC GGTGGTGTCG
CTGGCCGTGC TCATGTGGCT GGTCAACTAC ACCAAATTAG GTCGCGCCAT GCGGGCCACG
GCCGAGAATC CACGCGTGGC GGCGCTAATG GGCGTCAAAC CCGACCTCGT GATTTCTGCC
ACCTTCGTGA TTGGTGCGGT GCTGGCGGCC ATTGCCGGCG TGATGTGGGC TGCGAACTAC
GGCACGGTGC AGCACACCAT GGGCTTTTTG CCGGGTCTGA AAGCCTTCAC AGCAGCCGTG
TTTGGCGGTA TTGGTAATTT GGGCGGCGCT GTGCTGGGTG GCATCTTGCT GGGTCTGATC
GAATCCCTGG GTGCCGGCTA CATTGGCACG GTGACGGGTG GCGTGCTGGG CAGCCACTAT
TCCGATATTT TTGCCTTCAT TGTGCTGATC TTTGTGCTGA CCTTGCGACC CTCGGGCTTG
CTCGGTGAGC GCGTGGCAGA TCGTGCCTGA
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| Protein sequence | MDTFIQQIIN GLVLGSMYAL VALGYTMVYG IIGLINFAHG EVLMVGALTS WTIIGWMQEA
MPGTPGWLIL LISLIIACVV SATLNFVIEK VAYRPLRDSP RLAPLITAIG MSLLLQTLAM
IIWKPNYKPY PTLLPRTPFE IGGAVITPTQ VLILGMTVVS LAVLMWLVNY TKLGRAMRAT
AENPRVAALM GVKPDLVISA TFVIGAVLAA IAGVMWAANY GTVQHTMGFL PGLKAFTAAV
FGGIGNLGGA VLGGILLGLI ESLGAGYIGT VTGGVLGSHY SDIFAFIVLI FVLTLRPSGL
LGERVADRA
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