Gene Rfer_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3154 
Symbol 
ID3962550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3491290 
End bp3491718 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID637917973 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_524394 
Protein GI89901923 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCC GTCCGCGTCA AAAGGAAGAG CCCGAGATCA ACCTGATCCC GTTCATTGAC 
GTGTTGTTGG TGGTGCTGAT TTTCTTGATG CTCTCCACCA CCTACAGCAA GTTCACCGAA
CTGCAACTCA AGCTGCCGGT GGCTGACACC GAAGCCCAGC GCGATTACCC CAGGGAGGTG
CTGGTCAGCG TCAGCAGCGA AGGAGCGTAT ACCGTCAACA AGACGCCCGT GGCGGGCCGC
AGCGTGGACA TCGTCGCCGC CGCCCTGAGC GAAGGTGCCA AAGCGGGCAA GGACTCGGTG
GTGATCATCC ATGCCGACGC CAGTGCCCGG CACCAGGACG TGATCACGGT CATGGAAGCG
GCCCGACGCG CCGGGCTGAG CCAAATCACC TTCGCCACCC AGTCGACGGC GCATGCCAGG
GGCAACTGA
 
Protein sequence
MNFRPRQKEE PEINLIPFID VLLVVLIFLM LSTTYSKFTE LQLKLPVADT EAQRDYPREV 
LVSVSSEGAY TVNKTPVAGR SVDIVAAALS EGAKAGKDSV VIIHADASAR HQDVITVMEA
ARRAGLSQIT FATQSTAHAR GN