| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3152 |
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| Symbol | |
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| ID | 3962548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3488970 |
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| End bp | 3490388 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637917971 |
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| Product | exodeoxyribonuclease VII, large subunit |
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| Protein accession | YP_524392 |
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| Protein GI | 89901921 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.782441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGA ACAAGGCCTG CCATTGTGGA GCATTCCCCT GTCACAGCCC GACGCCAGCG
GTCGTTTTCT TCATGTTTGA AACCGACAAC CCCGCCATGA CGCCCCGCGT CTGGCAAATT
GGCGCGCTCT GCCGCGCCAT CGCTGCTGCG CTCGATTCCC GTTTTAACCC GGTCGTCGTG
CGCGGCGAAT TGTCGGGTTT CTCGCGCGCG TCGAGCGGGC ATTGTTATTT TTCCCTCAAG
GATGAAAGTG CGCAGGTTCG TTGCGCCATG TTTCGCCGCG CTGCCAGCTC GCTCGACTTT
TCGCCGCGCG ACGGCGAACT GGTCGAGGTG CGTGGTCGTC TGGGGGTCTA TGAGCCGCGT
GGCGATCTGC AATTGATTGT GGAGAGCATG AGCCGGGCCG GGCAGGGTGC GCTGTTTGAG
CAGTTTCTCC AACTCAAAGC CAAGCTGGAA GCCCAAGGGC TGTTCGCTGC CGAGCGCAAA
CGCCAGCTAC CCGTTTTGCC GCGTGGCATT GGCGTGGTGA CGTCGCTTGG TGCGGCCGCT
TTGCACGATG TGGTGACGAC CCTGCAGCGG CGCGTGTCGC ACATCCCGGT GGTCATTGCG
CCAGCCACGG TGCAGGGCAG CAACGCACCC GGCGAGTTGA TTCAGGCGCT ATTAAATTTA
TATCGGCTTA CGCAGGAAGG ACGGGGGCTA GAGCCTGATT TTACTAAAAA GACAAAGAAG
AAGGGCGAGT CCGCCGCACC CTGCATCGAT GTCATTTTGC TGGTGCGCGG GGGCGGTTCG
ATGGAGGATT TATGGGCCTT CAACGACGAG CAACTGGCGC ACACATTGGC GCAAAGCCCG
GTGCCCATTG TTTGCGGCGT CGGCCATGAA ACCGACTTCA CCATCGCTGA TTTTGTGGCC
GACCTGCGCG CGCCAACACC CACCGCCGCG GCCGAGTTGG TGGCGCAGCC GCGTCAGCTC
TGGCTGGGCG CGCTTGATGC GGCGGCGCGC CGCCTGCAGG ATGCCGTGCT GCGCCGCCTG
GATCAGCAAA GCCAGCGTCT GGATCTGACA ACGTCGCGCC TTGGGCGACC GTCGGCGCTG
GTCGGGCGTC AAGGCCTGCG CCTGGGCGCT AGCGCGCAAC GGCTGCAACT GGCATCAACC
CATTTTGTGC AGCAAAGACA GCAAGCCTTG CTGCGGCAGC AGGCGGCTTT GCCCACGGCG
GCGCAGCGCG GCCTGCAGCG CCAGGACGAG CGTCTGCAGC GCGCGGCATT GCGGCTGGGC
CTGCTCGACC CGCACCTGGT GCTTGCGCGC GGCTACGCCT GGTTGAGCAC GCCGGACGGT
GTCGGCATCA GCAGCGTGCA GCAAACCTGG CCCGGTCAGG CCGTGCGGGC CACCCTTGCC
GATGGCGCGG TTGATTTGAC GGTGACCCCC TCGATTTGA
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| Protein sequence | MATNKACHCG AFPCHSPTPA VVFFMFETDN PAMTPRVWQI GALCRAIAAA LDSRFNPVVV
RGELSGFSRA SSGHCYFSLK DESAQVRCAM FRRAASSLDF SPRDGELVEV RGRLGVYEPR
GDLQLIVESM SRAGQGALFE QFLQLKAKLE AQGLFAAERK RQLPVLPRGI GVVTSLGAAA
LHDVVTTLQR RVSHIPVVIA PATVQGSNAP GELIQALLNL YRLTQEGRGL EPDFTKKTKK
KGESAAPCID VILLVRGGGS MEDLWAFNDE QLAHTLAQSP VPIVCGVGHE TDFTIADFVA
DLRAPTPTAA AELVAQPRQL WLGALDAAAR RLQDAVLRRL DQQSQRLDLT TSRLGRPSAL
VGRQGLRLGA SAQRLQLAST HFVQQRQQAL LRQQAALPTA AQRGLQRQDE RLQRAALRLG
LLDPHLVLAR GYAWLSTPDG VGISSVQQTW PGQAVRATLA DGAVDLTVTP SI
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