Gene Rfer_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3140 
Symbol 
ID3962536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp3479850 
End bp3480443 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content61% 
IMG OID637917959 
ProductTetR family transcriptional regulator 
Protein accessionYP_524380 
Protein GI89901909 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.137738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATGG GACGCCCACG AGGATTTGAT GCTGACGAGA TGCTGGACAA GGTCGTCAAT 
GTGTTCTGGC AACACGGTTA TGAGGGCACA TCCATGGCCA CCTTGATGGC TGCCACAGGC 
CTCAACAAGC CCAGCCTGTA TGCCGCTTTC GGCAGCAAGG AAGAATTGTT CCGCTGCGCG 
CTCGAACGCT ACTGGCAACG CCAGGGAGAA CTCACTCGAA AACATTTGGA TGAGCCTGAT 
GCTCGCACCG GTGTGGAGCA CATGCTTCTG GCGCTGGTGG ACATTCAAAC CCAGCCTGGC 
TTGCCGCATG GCTGCCTGGC TGTTCACGGT GGACTGGTGG GCAGTGTTGC CAGTGCCGCC 
GTCAGGGACG AACTGAGGGC GCGCCAGGCA GCGCTGCAAA CCATGGTGCG GGACCGTCTG 
ACTCTCGCTC AGGCCGAAGG CGAGCTGGCC TCCAGCGTTG ATGTCGCCGA TTTGGCACGC 
TATCTAACCA TGGTGGGACA GGGCGCAGCC GTACAAGCCG CTGGCGGCGC AACCAGAGAG 
GAACTGCGTC GTGCCGTGAA AGTGGCGATG CGGGCTTGGC CAGAGGCTGA CTGA
 
Protein sequence
MAMGRPRGFD ADEMLDKVVN VFWQHGYEGT SMATLMAATG LNKPSLYAAF GSKEELFRCA 
LERYWQRQGE LTRKHLDEPD ARTGVEHMLL ALVDIQTQPG LPHGCLAVHG GLVGSVASAA 
VRDELRARQA ALQTMVRDRL TLAQAEGELA SSVDVADLAR YLTMVGQGAA VQAAGGATRE 
ELRRAVKVAM RAWPEAD