| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3133 |
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| Symbol | |
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| ID | 3962529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3472500 |
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| End bp | 3473354 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637917952 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_524373 |
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| Protein GI | 89901902 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.12142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAC TACGCTACGG ATTGCCAGGT CAGGAAAAAC CCGGTGTATT GGATGCCCAG
GGGCGCGTGC GCGACCTCTC AGGGGTGATT ACCGATGTGG CGGGCGCGGT CCTGCTGCCC
GAGAGCCTGG CGCGTTTGCG TGGCGTGAAC ATGGAGAGCT TGCCCCTGGT GGCAGGCACA
CCGCAAAAAG ACTTGCGCCT GGGAGCCTGC GTGGGCAAGG TGGGCAAGTT CATTTGCATC
GGCCTGAATT ACTCTGACCA CGCGGCCGAG AGCGGCATGC AGGTGCCGCC AGAACCGGTG
GTATTCAACA AATGGACCAG CGCCATCGTC GGGCCTGACG ATGCGGTGGA GATTCCCCGT
GGCTCGGTGA AGACCGACTG GGAAGTGGAG CTCGGTGTGG TTATCGGCCA AGGTGGCCGC
TACATTGAGG AAGCTGATGC CTTGTCGCAC GTGGCGGGCT ACTGCGTGGT CAACGATGTG
TCGGAACGCG AATTCCAGCT CGATCGCAGT GGCACCTGGG ACAAGGGCAA GGGTTGCGAC
ACCTTTGGCC CCACCGGCCC CTGGCTGGTC ACCGCCGATG AAGTGCCTGA CCCGCAAGCC
CTGAAGCTGT GGCTGGAGGT GGACGGCAAG CGTTATCAAG ACGGCAGCAC ATCGACCATG
GTGTACGGGG TCAAGTTCCT GATTTCCTAC CTGAGCCGCT TCATGAGCCT GCAGCCCGGC
GACATCATTT CCACCGGCAC CCCACCCGGT GTCGGGCTGG GGCAAAAGCC GCCGGTTTAC
CTGCGCGCCG GACAAACCAT GCACCTGGGC ATTGAAGGCT TGGGGCACCA AACACAAACG
ACAGTACAAG CCTGA
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| Protein sequence | MKLLRYGLPG QEKPGVLDAQ GRVRDLSGVI TDVAGAVLLP ESLARLRGVN MESLPLVAGT
PQKDLRLGAC VGKVGKFICI GLNYSDHAAE SGMQVPPEPV VFNKWTSAIV GPDDAVEIPR
GSVKTDWEVE LGVVIGQGGR YIEEADALSH VAGYCVVNDV SEREFQLDRS GTWDKGKGCD
TFGPTGPWLV TADEVPDPQA LKLWLEVDGK RYQDGSTSTM VYGVKFLISY LSRFMSLQPG
DIISTGTPPG VGLGQKPPVY LRAGQTMHLG IEGLGHQTQT TVQA
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