Gene Rfer_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3132 
Symbol 
ID3962528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3471174 
End bp3472304 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content53% 
IMG OID637917951 
Productporin 
Protein accessionYP_524372 
Protein GI89901901 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.011649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCGA CATCTAGCAA ACAAGCACCA ACGTCTCAAG ATACACGAAT CTTGTGCCTG 
ACCCGTAAAC ACAGCGTCTA TGCAACTGGC CTCGGACTTC TCCTCACAAC TTTTTGTGCA
AGCTCGCACG CAGAAATCGC CATCAATGTT CCGAATGCAA ATCTTTCGAT TTACGGCCGT
GTCGCAAGTG GTGTGTCCTA TGTCGACAAC ATTGGCGCAG CCGGCGACAG CGTCTTTCGC
GCAGCAAGCA ATGAATGGGG GACCAGTTTG CTCGGCCTGA ACGGTTCCAA AGAAATTGCA
CCCGGCATCC AAGGGCAAAT CAAATTGGAA ACCGGGTTTA GTGCAGCGAA CGGTAACAGC
AATGCAGGCA ATCTCTTTAG CCGCTTTGCA ACTGTTGGCA TTAAGAGCAA TACCATGGGA
ACTATCGAAT TTGGGCGTTC ACTGGCCTAC AGCAACGACG CGTGGTCTCT GGACCCGATG
GGGATGAACT GGTCCGGGGT GGACTCGTTG TCCAAAGGGC ATAACTGGGG TACATGGAAT
AACACCGTGG GTTACCGCAG CCCGAACCTG AGCGGCTTCG AGGCAGGTCT GCAGCTTTCC
TTGGGCGGGC AGGCAGGTAA CAATTCCGCA GGTCGCAGCC TGGCTGCCTC CTTGAGTTAC
ACACACGCAA ACCTGAATGT CCGGGCGATC TACGATGAGA CACGCGACGC AAACGGAAAA
TTGTCTGATT TGTTCAATGC ATCAAGTGAA TACATCGTCG GTGCAACTTA CAAGATTCAA
TCGACGACCT TGTTTGCCGC CTACAACCGG ATCTCTGCGT CCGATGCTGC TTCGGGCACG
GACACTGCAA TGGACCATAG TTGGGTCGGT GTCAACTATC AGCTCAACCC CGATAACCTC
GTCCGAGTGG GTCTATTTAC TGCCAAGACT GACGTGACAA ATGCAAAGGC GAATTTGTAC
ACGGTCGGTT GGGACCATAA GGTCAATGAT GCTTTGTCCT TATGGGCAAG CGCAGCGCTC
ATGGACAACA ACAAAAACGC TGCCTTCCCT GCTGTCGGCT ACTGGCAGGA TGCTCCAGCG
CCCGGAGCAA CACAGCACGG GATCAATGCG GGCTTCATCT ACGTATTCTG A
 
Protein sequence
MNSTSSKQAP TSQDTRILCL TRKHSVYATG LGLLLTTFCA SSHAEIAINV PNANLSIYGR 
VASGVSYVDN IGAAGDSVFR AASNEWGTSL LGLNGSKEIA PGIQGQIKLE TGFSAANGNS
NAGNLFSRFA TVGIKSNTMG TIEFGRSLAY SNDAWSLDPM GMNWSGVDSL SKGHNWGTWN
NTVGYRSPNL SGFEAGLQLS LGGQAGNNSA GRSLAASLSY THANLNVRAI YDETRDANGK
LSDLFNASSE YIVGATYKIQ STTLFAAYNR ISASDAASGT DTAMDHSWVG VNYQLNPDNL
VRVGLFTAKT DVTNAKANLY TVGWDHKVND ALSLWASAAL MDNNKNAAFP AVGYWQDAPA
PGATQHGINA GFIYVF