Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3132 |
Symbol | |
ID | 3962528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3471174 |
End bp | 3472304 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637917951 |
Product | porin |
Protein accession | YP_524372 |
Protein GI | 89901901 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.011649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCGA CATCTAGCAA ACAAGCACCA ACGTCTCAAG ATACACGAAT CTTGTGCCTG ACCCGTAAAC ACAGCGTCTA TGCAACTGGC CTCGGACTTC TCCTCACAAC TTTTTGTGCA AGCTCGCACG CAGAAATCGC CATCAATGTT CCGAATGCAA ATCTTTCGAT TTACGGCCGT GTCGCAAGTG GTGTGTCCTA TGTCGACAAC ATTGGCGCAG CCGGCGACAG CGTCTTTCGC GCAGCAAGCA ATGAATGGGG GACCAGTTTG CTCGGCCTGA ACGGTTCCAA AGAAATTGCA CCCGGCATCC AAGGGCAAAT CAAATTGGAA ACCGGGTTTA GTGCAGCGAA CGGTAACAGC AATGCAGGCA ATCTCTTTAG CCGCTTTGCA ACTGTTGGCA TTAAGAGCAA TACCATGGGA ACTATCGAAT TTGGGCGTTC ACTGGCCTAC AGCAACGACG CGTGGTCTCT GGACCCGATG GGGATGAACT GGTCCGGGGT GGACTCGTTG TCCAAAGGGC ATAACTGGGG TACATGGAAT AACACCGTGG GTTACCGCAG CCCGAACCTG AGCGGCTTCG AGGCAGGTCT GCAGCTTTCC TTGGGCGGGC AGGCAGGTAA CAATTCCGCA GGTCGCAGCC TGGCTGCCTC CTTGAGTTAC ACACACGCAA ACCTGAATGT CCGGGCGATC TACGATGAGA CACGCGACGC AAACGGAAAA TTGTCTGATT TGTTCAATGC ATCAAGTGAA TACATCGTCG GTGCAACTTA CAAGATTCAA TCGACGACCT TGTTTGCCGC CTACAACCGG ATCTCTGCGT CCGATGCTGC TTCGGGCACG GACACTGCAA TGGACCATAG TTGGGTCGGT GTCAACTATC AGCTCAACCC CGATAACCTC GTCCGAGTGG GTCTATTTAC TGCCAAGACT GACGTGACAA ATGCAAAGGC GAATTTGTAC ACGGTCGGTT GGGACCATAA GGTCAATGAT GCTTTGTCCT TATGGGCAAG CGCAGCGCTC ATGGACAACA ACAAAAACGC TGCCTTCCCT GCTGTCGGCT ACTGGCAGGA TGCTCCAGCG CCCGGAGCAA CACAGCACGG GATCAATGCG GGCTTCATCT ACGTATTCTG A
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Protein sequence | MNSTSSKQAP TSQDTRILCL TRKHSVYATG LGLLLTTFCA SSHAEIAINV PNANLSIYGR VASGVSYVDN IGAAGDSVFR AASNEWGTSL LGLNGSKEIA PGIQGQIKLE TGFSAANGNS NAGNLFSRFA TVGIKSNTMG TIEFGRSLAY SNDAWSLDPM GMNWSGVDSL SKGHNWGTWN NTVGYRSPNL SGFEAGLQLS LGGQAGNNSA GRSLAASLSY THANLNVRAI YDETRDANGK LSDLFNASSE YIVGATYKIQ STTLFAAYNR ISASDAASGT DTAMDHSWVG VNYQLNPDNL VRVGLFTAKT DVTNAKANLY TVGWDHKVND ALSLWASAAL MDNNKNAAFP AVGYWQDAPA PGATQHGINA GFIYVF
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