| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3131 |
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| Symbol | |
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| ID | 3962527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3470163 |
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| End bp | 3471107 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917950 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_524371 |
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| Protein GI | 89901900 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00793964 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAA AAAGAAAACT GCTGGCTTTG ACCGCCAGCC TGGCCCTGGC AGGTTTTGCC
AGCATCGCAT CCGCCCAAGA TGTCTACATT CCGCTGATCT CCAAAGGCTT TCAGCACCAG
TTCTGGCAAG CAGTGAAACA AGGCGCTGAC CAGGCCGGCA AAGACTTCAA GGTCAAGGTC
ACGTTTGAAG GCCCCGAGAC CGAGCAGCAA GTGGACAAGC AAATCGACAT GCTGTCTGCT
GCCTTGGCTA AAAAGCCCGC CGCCATTGGC TTTGCAGCGC TCGACAGCAA GGCGGCTATT
CCGCTGCTGA AAAAAGCCCA GGCCGCCCAC ATCCCGGTGA TTGCGTTTGA CTCCGGCGTG
GACAGCGACA TTGTGCTGAC CACCGCACAA ACCGACAGCA AGGCAGCCGC CGCATTGGCC
GCCGACAAAA TGGCTGAAAA AATTGGCGGC GAAGGTGAAG TGGCTGTGAT TGGGCACGAC
CAGACCAGCA CCACCGGCAC CGGCCGCCGC GATGGTTTTG TGAATCAGAT CAAGGCCAAG
TACCCCAAGA TCAAGGTGGT GGACATTCAG TACGGCGGTG GCGACCACCT CAAGTCAGCT
GAAATTGCCA AGACCCTGAT GCAAGCCCAC CCCAAGCTCA AAGGCATCTT CGGCACCAAC
GAGGGTTCTG CCATTGGCGC CGGCAAGGGC TTGAAAGAAG CCAAGAAAAC CGGTGTGGTC
ATCATTGGTT TTGACTCCGG CAAAGCCCAA AAGGACATGA TCAACGACGG CACGATTGCG
GGCGCGATCA CCCAAAACCC GGTTGGCATT GGTTACAAAA CCGTGGAAGC AGCTGTGAAG
GCACTCAAGG GCGAGAAGTT GCCCAAGATC ATCGACACCG GCTTCTACTA CTACGACAAG
TCGAACATGA AGGACGCCAA GATTGCGGCC GTTCTTTACG ATTGA
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| Protein sequence | MNAKRKLLAL TASLALAGFA SIASAQDVYI PLISKGFQHQ FWQAVKQGAD QAGKDFKVKV
TFEGPETEQQ VDKQIDMLSA ALAKKPAAIG FAALDSKAAI PLLKKAQAAH IPVIAFDSGV
DSDIVLTTAQ TDSKAAAALA ADKMAEKIGG EGEVAVIGHD QTSTTGTGRR DGFVNQIKAK
YPKIKVVDIQ YGGGDHLKSA EIAKTLMQAH PKLKGIFGTN EGSAIGAGKG LKEAKKTGVV
IIGFDSGKAQ KDMINDGTIA GAITQNPVGI GYKTVEAAVK ALKGEKLPKI IDTGFYYYDK
SNMKDAKIAA VLYD
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