| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3118 |
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| Symbol | |
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| ID | 3962131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3456731 |
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| End bp | 3457741 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917937 |
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| Product | ABC transporter, substrate-binding protein |
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| Protein accession | YP_524358 |
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| Protein GI | 89901887 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.671223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAG CCCATACCCC ATCCCAACTT TTCAAAGCAT TGGCACTCGC AGCTGCGGTA
ATTGCGTCCT CGACTGCCAT CGCAGCGGAC AAGGTGACCA TCATGGTCGG TGGCTATGAA
AAGCACATCT ATTTGCCGGC CAAACTGGCT GAAGGCTTGG GTTATTTCAA GGCCGAAGGG
CTGGACGTCG AGCTGCTGAA CGAAGGCGCT GGCGTAGATG CCGAAAACGA AATGCTGGCC
GGTGCTGTGC AAGGTGTCGT GGGCTTCTAC GACCATTGCG TCGATTTGCA GACCAAAGGC
AAATATGTTG AATCCGTGGT GCAGTTCAGC CAGGCCCCAG GTGAAGTTGA ACTGGTGTCC
ACCAAGCACC CTGAAATCAA ATCCATGGCC GACCTGCGCG GCAAAAGCCT GGGCGTCACC
GGCTTGGGCT CTTCCACCAA TTTCCTGTCG CAATACCTGA TGGTCAAGGC CGGTGTTCCA
CTGGGCGAAT TCACGTCCAT TCCCGTGGGT GCTGGAACGA CCTTCATCGC AGCGATGACG
CAGGACAAGA TTCAGGCCGG CATGACCACC GAGCCCACCA TCTCGCGCCT GCTCAAGACC
GGCGAGGCAC GCGTTCTGGT GGATATGCGA TCCATAGAGA AGACCAAACA GGCGCTGGGT
GGAACCTACC CTGCGGCCTC GCTGTACATG CCCACCGATT GGGTCGAGAA GAACAAGCCG
ACGGTCCAGA AGCTGGCCAA CGCGTTTGTC AAGACACTGA AATACATCAA CACGCACAGC
GCTGCCGAGA TTGCCGACAA GATGCCCAAG GATTTCTATG TGGGTGATAA GGAGGGCTAT
GTCAAAGCTT TGGCGGACGG CAAGAGCATG TTCACGGCGG ATGGCGTGAT GCCAGCCGGT
GGACCTGAGA CTGTGCTCGC GGTCCTTTCT GGGTTCTCCA AGAATGTCAA GGGGAAAACG
GTGGACTTGT CGAAAACTTT CACCACCGAG TTCGTGAAGA ACGCCAAGTA A
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| Protein sequence | MQTAHTPSQL FKALALAAAV IASSTAIAAD KVTIMVGGYE KHIYLPAKLA EGLGYFKAEG
LDVELLNEGA GVDAENEMLA GAVQGVVGFY DHCVDLQTKG KYVESVVQFS QAPGEVELVS
TKHPEIKSMA DLRGKSLGVT GLGSSTNFLS QYLMVKAGVP LGEFTSIPVG AGTTFIAAMT
QDKIQAGMTT EPTISRLLKT GEARVLVDMR SIEKTKQALG GTYPAASLYM PTDWVEKNKP
TVQKLANAFV KTLKYINTHS AAEIADKMPK DFYVGDKEGY VKALADGKSM FTADGVMPAG
GPETVLAVLS GFSKNVKGKT VDLSKTFTTE FVKNAK
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