Gene Rfer_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3113 
Symbol 
ID3962126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3451333 
End bp3451962 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content64% 
IMG OID637917932 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_524353 
Protein GI89901882 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.050755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGC TCACGACCCT CATCACCATC TGGATTCTCC ACGTCGCTGC CCTGGCCACA 
CCGGGCGCCA ATGTTTTGCT GGTGTCGCAG CTGGCGGCCA GTGACCGTGC CCAAAGTGCG 
GTGTTTGCGG CCTTGGGCGT GACGTTGGGC GCGTTCGTTT GGGCCAGCAG TGCGGTGCTG 
GGTGTGCACG CCCTCTTTCA GGCTTTCCCG GGTTTGCGCC TGGCCTTGCA GATTGCCGGC 
GGCGTCTACC TGCTGGTGGT GGCTGGTCGC TTGTGGCGCT CCGGCGCTGC GGCGCTCATC 
GAAAGCCGTG CATCGGTGTC TCGCCGCGCC GCATTTCGCC TTGGATTTTT GACCAACATC 
ACCAACCCAA AGTCCGCGCT GTTCTTCGGC AGCGTGTTTG CGGCTTCGTT TCCTGCAGCA 
CCCAGCCCGC TCCTGCAAAT GGCGGCGGTG GCCATGATCG TGACCAACGC ACTGAGCTGG 
CATATCCTGC TGGCCTACCT GTTCTCGCGC GCGCAGGTGC GTTCGGGTTA CTCGCGCGTG 
CGCGGCCTGG CCAATCGCAT GGCGGCCGCG GTGGTTGGCG TTTTGGGCCT GGGGCTTTTG 
GTGGCGACCT TGCGCGATGC CAGAGCGTAG
 
Protein sequence
MEMLTTLITI WILHVAALAT PGANVLLVSQ LAASDRAQSA VFAALGVTLG AFVWASSAVL 
GVHALFQAFP GLRLALQIAG GVYLLVVAGR LWRSGAAALI ESRASVSRRA AFRLGFLTNI 
TNPKSALFFG SVFAASFPAA PSPLLQMAAV AMIVTNALSW HILLAYLFSR AQVRSGYSRV 
RGLANRMAAA VVGVLGLGLL VATLRDARA