| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3103 |
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| Symbol | |
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| ID | 3962116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3442293 |
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| End bp | 3443852 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917922 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_524343 |
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| Protein GI | 89901872 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.376049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAC CTATCAAACC GCTTCGCGCC AAGGCCTTGG CTGGCGGCCT GCTGACTCTG
CTGGCGTTGG CGTCTGCTGG CTCGGCCCTT GCCGCGAAGG ATGTGGTGCT GGCCATTGGC
GGACAACCCG AAACCCTGGA TCCTTACAAC ACCAACACCA CGCTAACCAC AGCCGTCACC
AAGTCCTTTT ACCAGGGGCT TTTTGAATTT GACAAGGATC TGAAAATTCA GCCGGTGCTG
GCCGAAAGCT TCACTGTTTC CAAAGACGGT CTTGTGTACA CCTTCAAGCT GCGTCAGGGC
GTGAAGTTTC ACGATGGCAC CGATTTCAAT GCCGAGGCGG TGAAGGTGAC GCTGGATCGC
GTGCTCAATG CCGAAAACAA ACTCGCCCGT ACCAACCAGT TCAACCGCAT CGAAAAAGTG
GAAGTCGAGT CACCCTTGAC CGTGCGCGTG ACACTGAAGG AGCCTTTTGC GCCCTTTATC
AATTCGCTGG CCCATGCTTC TGCTGTGATG ATGTCGCCCG CTGCGCTTAA AAAATACGGC
AGCAAAGACA TCGCATTCAA CCCTGTTGGC ACTGGCCCTT TTACTTTTGT TGAGTGGAAG
CAGACTGATT TTGTGAAAGG TAAAAAATTC GACGGTTACT GGAAAAAGGG CTACCCCAAG
GTCGATACGG TGACATGGAA ACCTGTGCTG GAAAACAGCA CGCGTGCCGC GATGTTGCAG
ACCGGCGAAA CTGATTTCGC CTTCCCTTTA CCCTACGAGC AGGCGGCAGA ACTCAAAAAG
AACGCCAAAC TCGATCTGAT GACCGGCCCG TCCATCATTA CCCGCTACAT CAGCTTCAAC
ATGCTGCAAA AGCCGTTTGA CAACGTTAAG GTGCGCCAGG CGATCAATTA CGCCATCAAC
AAGGAGGCGT TGGTAAAAGT GGCCTTCAGC GGCTACGCCT TCCCGGCTCA GGGCATCGTT
CCGCAAGGCG TGAAATATGC GCACAAGATG GCACCATGGC CATATGACCC GAAGAAGGCG
CGCGAATTGC TGAAGGAGGC GGGCTACGCC AATGGCTTCG AGTCGGTGCT ATGGGGCGCA
TACACCAACA CCACGACGCA AAAGACGCTG CAGTTTGTGC AGCAGCAACT CGCTCAGGTC
GGCATCAAGA TCACCGTGCT AGCGCTGGAG CCCGGCCAGC GTACCGACTG GGTGCAGGCA
GCGCCGGACT CGAAAACGGC CAAGGTGAGG ATGTATTACG CGGGCTGGTC AGCCTCGACC
GGTGAAGCCG ACTGGGCACT GCGCCCCCTG CTGGCCACCG AATCTTGGCC ACCGAAGTTG
AACAACACCG CTTACTACAG CAACAGCAAG GTAGATGCCG ACATTGCGAA CGCGCTGAAG
TCGGTCGATG AGAAAGAAAA GACCGCGTTG TACCGCGATG CACAGGAGCA GATCATGAAA
GACGCGCCTT GGGCACCCCT GGTGACGGAG CAGAACCTTT ACGCCACCAG CAAGCGACTC
TCGGGCGTAT ATGTCATGCC TGACGGCAGC ATTCACTCCG AGGAAGTTGC CGTCAAGTAA
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| Protein sequence | MTKPIKPLRA KALAGGLLTL LALASAGSAL AAKDVVLAIG GQPETLDPYN TNTTLTTAVT
KSFYQGLFEF DKDLKIQPVL AESFTVSKDG LVYTFKLRQG VKFHDGTDFN AEAVKVTLDR
VLNAENKLAR TNQFNRIEKV EVESPLTVRV TLKEPFAPFI NSLAHASAVM MSPAALKKYG
SKDIAFNPVG TGPFTFVEWK QTDFVKGKKF DGYWKKGYPK VDTVTWKPVL ENSTRAAMLQ
TGETDFAFPL PYEQAAELKK NAKLDLMTGP SIITRYISFN MLQKPFDNVK VRQAINYAIN
KEALVKVAFS GYAFPAQGIV PQGVKYAHKM APWPYDPKKA RELLKEAGYA NGFESVLWGA
YTNTTTQKTL QFVQQQLAQV GIKITVLALE PGQRTDWVQA APDSKTAKVR MYYAGWSAST
GEADWALRPL LATESWPPKL NNTAYYSNSK VDADIANALK SVDEKEKTAL YRDAQEQIMK
DAPWAPLVTE QNLYATSKRL SGVYVMPDGS IHSEEVAVK
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