Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3102 |
Symbol | |
ID | 3962115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3440291 |
End bp | 3442222 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917921 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
Protein accession | YP_524342 |
Protein GI | 89901871 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.94565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCCA CCAAACGCGA CCCAATGAAC TCTTCCTTGG CTGAGGCTGC GAAGTCAACT GCTTTGCCGT TGCGGGCAAT GCCGGGTAAT CGAGTACTGG CGGTCGACAA CCTGTCAGTG CGGTTTACCA CCTCTGAGCG TACCGTTGAC GCGGTGTGCG GGCTATCGTT TCACGTTGAC CAGTGCGAAA CCTTGGCCAT TGTGGGTGAA TCAGGCTCGG GCAAATCAGT CACCTCGCTG GCATTGATGC GACTGGTCGA GCATGGCGGC GGGCGCATCG TCAACGGCAG CATGATGTTA AGGCGCCGTA GCGGCGATGT GCTTGACCTG GCACAGGCGC GCAACGCCAC GCTGCGCAGT ATCCGCGGTG CCGACATTGC GATGATTTTC CAGGAGCCGA TGACCTCGCT CAACCCAGTA TTCACAGCCG GTGACCAGAT TGCAGAATCC ATTCGGGTGC ACCAGGGAAA AAGCGCCTCG GCAGCAAAGG CCGAGGCATT GCGCATGCTG GAGTTGGTGC GTATTCCGGA AGCACGCAAC GTGCTGGATC GCTTCCCGCA TCAGCTCTCG GGCGGCATGC GTCAGCGTGT GATGATTGCC ATGGCGCTGT CATGCAAGCC CTCGCTCCTG ATTGCCGATG AGCCAACCAC CGCCCTTGAC GTGACGATCC AGGCGCAGAT TTTGCAGCTG ATTCGGGCTC TGCAAGAAGA GATGCACATG GGTGTGGTCT TCATTACGCA CGACATGGGC GTGGTGGCCG AAGTGGCCGA CCGCGTTTTG GTGATGTACC GCGGCAACAA AGTAGAAGAA GGCGCGTCAG AGGAGATTTT TGCGCACCCT CGGCACGCTT ACACACGTGC GTTGCTCTCG GCCGTACCCA GGCTTGGCGC CATGGAAGGC ACCGAACTGC CGCTCAAATT TGAATTGCTT CGCACCGAAG AAGCCGACGC AGCGCCGACC GAGCCACCCC GCCGGCAAGA CACCGTAGTA CCTGGCAGTG CGCCGATATT GCGAGTGCAA GATCTGGTGA CCCGATTTGA TGTGCGGAGT GGATTTTTTG GCCGCGTTAC GCGCCGGGTG CATGCGGTTG AAAAGGTCAG CTTTGACATT CGTCCGGGCG AGACGCTGGC GCTCGTCGGT GAATCGGGCT GCGGCAAATC CACCACCGGT CGATCGCTGT TGCGTCTGGT TGAAAGTCAG AGCGGCGTGA TTGAGTTTGG CGGACAAAAC ATCCGCAACC TGCCCACCAG TACGCTACAG GGATTGCGGC GCAACATCCA ATTCATCTTC CAGGATCCGT TTGCCTCGCT GGACCCGCGC CTCACTGTTG GGTTTTCCAT CATGGAGCCC TTGCTGGTGC ACAAGATTGC CAAGGGCAAA CAAGCCCAGA AACGCGTCGA CTGGCTGCTT GAAAAAGTCG GTTTGCCGGC CGAGTTCGCC CAGCGCTACC CGCATGAGTT CTCGGGCGGC CAGCGCCAGC GCGTCGCCAT TGCGCGCGCG CTGGCGCTCA ATCCCAAGGT GGTGATTGCC GATGAATCAG TGTCGGCGCT CGACGTCTCG ATTCAAGCTC AGATCGTCAA CCTGATGCTG GACCTGCAGC GCGAGCTGGG CATCGCCTTT CTCTTTATTT CGCACGACAT GGCGGTGGTC GAGCGCATCA GCCACCGCGT GGCTGTGATG TTTCTGGGCC AGATTGTCGA AATTGGCCCG CGCCGCGCCA TATTCGAAAA CCCCCAGCAC GCCTATACCC GTAAGCTGAT GGCCGCAGTC CCCGTGGCCG ACCCGAGTCG CAGGCATCTG AGCCGTCAAC TGATGTCGGA TGAAATTCCA AGTCCGATTC GCGCCGTCGG TGACGAGCCC GTTGTACCAC CGCTGATCGA AGTGGGCCCC GAACATTTTG TCGCCAGGCA CCGTATCGCC GGTGCCTACT GA
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Protein sequence | MTPTKRDPMN SSLAEAAKST ALPLRAMPGN RVLAVDNLSV RFTTSERTVD AVCGLSFHVD QCETLAIVGE SGSGKSVTSL ALMRLVEHGG GRIVNGSMML RRRSGDVLDL AQARNATLRS IRGADIAMIF QEPMTSLNPV FTAGDQIAES IRVHQGKSAS AAKAEALRML ELVRIPEARN VLDRFPHQLS GGMRQRVMIA MALSCKPSLL IADEPTTALD VTIQAQILQL IRALQEEMHM GVVFITHDMG VVAEVADRVL VMYRGNKVEE GASEEIFAHP RHAYTRALLS AVPRLGAMEG TELPLKFELL RTEEADAAPT EPPRRQDTVV PGSAPILRVQ DLVTRFDVRS GFFGRVTRRV HAVEKVSFDI RPGETLALVG ESGCGKSTTG RSLLRLVESQ SGVIEFGGQN IRNLPTSTLQ GLRRNIQFIF QDPFASLDPR LTVGFSIMEP LLVHKIAKGK QAQKRVDWLL EKVGLPAEFA QRYPHEFSGG QRQRVAIARA LALNPKVVIA DESVSALDVS IQAQIVNLML DLQRELGIAF LFISHDMAVV ERISHRVAVM FLGQIVEIGP RRAIFENPQH AYTRKLMAAV PVADPSRRHL SRQLMSDEIP SPIRAVGDEP VVPPLIEVGP EHFVARHRIA GAY
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