Gene Rfer_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3093 
Symbol 
ID3963289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3429393 
End bp3430085 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID637917913 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_524334 
Protein GI89901863 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC TCGTAAGACT TATCGACCAA AAGCGCTGCA TGGGTTGCCG TGCCTGCTTG 
GCGGCCTGCG CCACTGAAAA TCACTTTACT CCGGAGGCCC CATGGAACGT CATGGTGGAA
TACGAGGTCG GGACCTACCC GCAGGTGAAG AAGGTGTACA ACCCCATGGG CTGCATGCAT
TGCGAACAAC CTTCTTGCAA GGCTGCCTGC GACTCCGTGG GTGCTAAGGC AATCAGCAAG
AACGCCTTTG GCGTGGTGCT GATCGACTAC GACAAATGCA TTGGCTGTGG TTATTGCGCG
GCGGTTTGTC CCTACGGCGT TCCGCAACTC AATAAGCAGG TGGCGCAACT CGCACCCGGC
AAGGAGAAAT TGGGTGCTGA GGGCATCGAT TACGCCGACC GTCATCCAAC CCATCGCAAA
AAAGCCAATG TGGCAGAGAA GTGCACGTTC TGCGCGCACA AGCTTGAACA GGCGGTGGCC
GATGGCAAAG TCGATCGTAT CGGCAAAGAT CAGGCTTACA CGCCAAGTTG TGATTTGGTG
TGCCCAGTGC AAGCTCGGAT GTTTGGCGAC ATGGATGACC CGAACTCCGA AATATCCAAA
CGTATCAAAG CCACGGGTGC AAAACAGTTG AAAACCAAGT TCGGCACCGG CCCACAGGTG
TATTACGTGC TCGAAGAAGG AGCTAAATCA TGA
 
Protein sequence
MTKLVRLIDQ KRCMGCRACL AACATENHFT PEAPWNVMVE YEVGTYPQVK KVYNPMGCMH 
CEQPSCKAAC DSVGAKAISK NAFGVVLIDY DKCIGCGYCA AVCPYGVPQL NKQVAQLAPG
KEKLGAEGID YADRHPTHRK KANVAEKCTF CAHKLEQAVA DGKVDRIGKD QAYTPSCDLV
CPVQARMFGD MDDPNSEISK RIKATGAKQL KTKFGTGPQV YYVLEEGAKS