| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3090 |
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| Symbol | |
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| ID | 3963286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3426699 |
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| End bp | 3428336 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917910 |
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| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
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| Protein accession | YP_524331 |
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| Protein GI | 89901860 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.595206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC CGGGCTGTAT GGCCGCCTTG ACACCGCTTG CGACTGGCGC CACGGTCTCA
CCTGAAGCAG TGCTGTTCGA ATCATTGGGT ACCGTTCTGG TGTTGGGTGA CGACGCCAGC
GTCGGTGAAG TCGCAGAAAT CGTCGCGCGC AATCACCGCA CGGTGGTATT TGCACCGGGC
ATAGAGGCGC GTGCCTTTGC TTCGCATGTG ACCACAGTGG GGCGGAAAGT CACCGCAGTG
CAGGGTCACC TGGGTGCCTT TCAAGCCCAA GTGCGATCTG CATCGGGAGT GAGCGACATT
GGCGCGGCCA GCCCCAACCC CAACCGGTTT TTCGACATGG TGCTCGATCT GTGTAGGCGA
CCGTTGTGGA CGTCGGAACT GGCCCCTTTG GGCTATTTCG CTCCAGGGGG CGGCGCAAAG
GAACAAGCTG CTGCATTTGA GGCCATGCTG GCCCTGGTTG GGAAATTCAC AAAACCTCGG
TATCTTTCCT ACCAAACCGA CTTGTGTGCC CATGGGGTCA GTGGTTTTCA GGGCTGCACT
CGCTGCCTTG ATGTTTGCTC TGTGCAGGCC ATTGCATCTG CTGGCAACAC GGTTCGTATT
GATCCTTACC TTTGTCAGGG CTGTGCCACC TGTACATTGG CCTGCCCGAC GGGCGCCTTG
AGTTTTAAAT TCCCGACCCG AGACGCGCTA GGCAGACGTT TGGAACAGAC TTTGAGTAAT
CCTGATACGG CCAAGACGGT GTTGATTGTT CATTCACGTC AACTTGCAGC GTCCGTCCAA
GCCACTATCG CCCAGCAAGG GGTGCTGTCG CTTGTGGTTG ACCCGCTACC GGCGTTTGGC
GACGAGCTCT GGCTGCGGGC CTTGGCCCTC GGGGCAGGTA CCTTGGTGCT GGTGGCTGAC
GAGTTGTTGT CGCCGAAGTC GCGCAGCGTC ATTGAGTCAC ACATGTTGCA GATGCATGCC
GCGTTGCCAA CGTTGGGACT GGCGCGTGAT CGCCTTGTTT GGCTTCAGGA GCGTGACTTG
GCACGATGGC TCGATGAATA TGGAGCCGAG CCGCTTGGGG CAAGGGGACA GAATGAACTG
GAGTCCGCCA GCAACGGGAG GCGACCCGTG TCCAGGCCTT CTGCGTCTCC TTCGTGGGCG
CGCTACAAGC GATTGGCGTG GATTGATGAC GTGAGGCTGT TGGGTGCGTC CGTCGGTGCC
GAAACGACGG CTGTGTTACC TGCGGGCTCG TCCTTTGGTC AGGTCCGCGT GAACGCGCAA
CGCTGCACGC TGTGTTTTGC CTGCGTCAAC CTGTGTCCCA CAAGCGCGCT GAAGGCGGTC
GATGCAAAGA CGCAGCAACT CGTGTTTCAA GAGAGTGCCT GCGTGCAGTG CGGTTTGTGT
GTTGTAGGTT GCCCGGAAGA AGCCCTTTCG TTACAGGCCC GGTTTGCGCC GCAGACCTTG
GCAAATATGA CACGCACCGT GTTGCAACAA GATGAACAGT TGGCCTGCAC TTCATGCGGC
ACACCGTTTG TCAGTCGACG CCTGCTGGCG TCCAGCCTGG CACGCCTCAA GGATCACCCG
GTCATGGCCA AGGGCGGACG CGAGGCACTG ATGACCTGCC CAAGCTGCCG ACAGCGAGAA
ATGCTCAGCC CGTCATGA
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| Protein sequence | MTAPGCMAAL TPLATGATVS PEAVLFESLG TVLVLGDDAS VGEVAEIVAR NHRTVVFAPG
IEARAFASHV TTVGRKVTAV QGHLGAFQAQ VRSASGVSDI GAASPNPNRF FDMVLDLCRR
PLWTSELAPL GYFAPGGGAK EQAAAFEAML ALVGKFTKPR YLSYQTDLCA HGVSGFQGCT
RCLDVCSVQA IASAGNTVRI DPYLCQGCAT CTLACPTGAL SFKFPTRDAL GRRLEQTLSN
PDTAKTVLIV HSRQLAASVQ ATIAQQGVLS LVVDPLPAFG DELWLRALAL GAGTLVLVAD
ELLSPKSRSV IESHMLQMHA ALPTLGLARD RLVWLQERDL ARWLDEYGAE PLGARGQNEL
ESASNGRRPV SRPSASPSWA RYKRLAWIDD VRLLGASVGA ETTAVLPAGS SFGQVRVNAQ
RCTLCFACVN LCPTSALKAV DAKTQQLVFQ ESACVQCGLC VVGCPEEALS LQARFAPQTL
ANMTRTVLQQ DEQLACTSCG TPFVSRRLLA SSLARLKDHP VMAKGGREAL MTCPSCRQRE
MLSPS
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