| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3088 |
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| Symbol | |
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| ID | 3963284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3424858 |
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| End bp | 3426168 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917908 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_524329 |
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| Protein GI | 89901858 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.417051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACGTA TTTTGCTGAT TGAAGATGAT CCGATCATGG GCGAGTCGCT GGTGCAGCGA
CTTGAACTCG AAGGCTTGCA GGTTCAGTGG TGCCACAGCC TGGGTCAGGC CCAGTTAGAG
GTGACAAAGG ATCACGCTGC CATCATCAGC GATGTGCGGC TGCCTGATGG GCTGGCCACA
GACTGGTTCG TGCAGTTGCC CGCGAGCATC CGTTCAGTGC CATGGTTTTT TCTCACCGGT
TATGGCAGCG TCAACGATGC TGTGCTAGCG GTGAGGGGCG GCGCCAGGGA ATACCTGACC
AAACCATTTG ATATTGAAAA ACTGCTTGAA TTGGTACAAA ACGCAGTGGC CAATCGACCA
CTTCCAACGC CAGAAGTGGT GTTAGGTATT TCACCCGCCA TGCGTCGGGT GGAGGCCCTG
GTGGTGAAAG TATCACAGCA AAAAGTTTCC GTTTTGCTCA ATGGGGAATC CGGTGTTGGC
AAAGAGGTTG CCGCACAACT GATTCACCGG CTTGACCCGC GGCCTGACAA GGGTGAGTTT
GTGGCAGTGA ACTGCGCTGC CATTCCAGAG ACCCTGTTGG AGGCAGAGTT CTTTGGCTAT
GAAAAAGGGG CTTTTAGCGG TGCGGGACGA CAACATCGTG GCTATCTTGA ACGCGCTGAT
CACGGCACAC TTTTTTTGGA TGAAGTGGGG GACTTGCCAG CCAACATGCA AGCCAAATTG
TTGCGTGCGC TGCAGGAAAA ATGTTTTTTT AGGCTCGGCT CCGAACGCAC CACACACAGC
GACTTCCGCG TGGTGGCGGC CACTAACCGG GACCTCTATG CCGACATGAC GGCCGGTCGG
TTTCGTGAAG ACCTGTTTTA CCGGCTCGCA GTCATCCGCA TCAATTTGCC GCCGCTTCGG
GAGCGACCCG AAGATATTCG CTGGCTAACC GAACGTCTGC TGGCCACTAT GGTGATAGAA
CAGAGCCGGC CACTGGCCAT GTCAGAAGTC TTTATGCGCG ACATCATGGG GCGCGACTGG
CGTGGCAATG TGCGTGAGTT GCGCTCTTAC CTGGAACAGG CGGTCGTCAT GAGCGACGCA
GGCATTCTGG ATGAACCGCT GCCCGACCAT CCGCACAACC GCGGCCCAAT CCCTGCGCCG
CCGACGGAAG CCATCATTCC TTTGCAGGCC ATGGTGGAAG ACGCAGAGCG TGTGCACATC
CGTAAGGCCT TGAACCGGTG CGAAGGCAGC GTCGGCAAGA CCGCAGAGTT GCTCGCCATC
TCGCGCAAGA CATTGTGGGA AAAAATGAAA CGACTGGCGA TCAGCGCCTG A
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| Protein sequence | MKRILLIEDD PIMGESLVQR LELEGLQVQW CHSLGQAQLE VTKDHAAIIS DVRLPDGLAT
DWFVQLPASI RSVPWFFLTG YGSVNDAVLA VRGGAREYLT KPFDIEKLLE LVQNAVANRP
LPTPEVVLGI SPAMRRVEAL VVKVSQQKVS VLLNGESGVG KEVAAQLIHR LDPRPDKGEF
VAVNCAAIPE TLLEAEFFGY EKGAFSGAGR QHRGYLERAD HGTLFLDEVG DLPANMQAKL
LRALQEKCFF RLGSERTTHS DFRVVAATNR DLYADMTAGR FREDLFYRLA VIRINLPPLR
ERPEDIRWLT ERLLATMVIE QSRPLAMSEV FMRDIMGRDW RGNVRELRSY LEQAVVMSDA
GILDEPLPDH PHNRGPIPAP PTEAIIPLQA MVEDAERVHI RKALNRCEGS VGKTAELLAI
SRKTLWEKMK RLAISA
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