Gene Rfer_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3078 
Symbol 
ID3962642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3407569 
End bp3408648 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content58% 
IMG OID637917898 
Producthypothetical protein 
Protein accessionYP_524319 
Protein GI89901848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0904064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC TCGAAGACTA CGAAGCCCGG GAAGAGCGGG CTGAGCGCGA AGCTGCGGCC 
GAGATGCGCG CATGTGCAGC TCACAAAGTG GCGATGGCGG TGCAGGCAGA GGTGCCGGCG
AGCGTGGCGG ACTACGCGCC TGCTGCGGCT GAGCGTGACG AGGCGCTCCT GAAGAAAGTG
CTGCACCAGA CGCGCCGGGT GCCGGCCGGC ATGGCCTTTC TCCCTACTGA GTTGACGCGC
GCTGGGCTGA TTCGGTCGCC CGCAAACAGC AACGATCGCC CCGAGTTGGT GAAGCAAGAG
CTGGCCATGG GGCGCGGGAT TCAGTCACTT GTGTATACCG GTCCAGAGCT GGGCCCGAAG
GAAGAGACGG CCTGGCTTGC GGTGCTGATG CTCGCGAGAA CGCAGATGCT CGGCACACGC
ATCTATTTCA AAATTGCAGA GCTCCTAAAG ATCTGCGGCT TGAACGACTC AGCCGACAAT
TTCGTTGCAA TGCGCATGCG CCTTAGCCGC TTGTCCCAAG CCCATTTCTC GATCGATTAC
ACAAGAAAAG TCGCTGGGAA GTCCAGAAAA TTTCACGTGG AAACGCACCT GCTCGGCTTT
GAGATTGAGC AAGAAACCGG AGATACGGTC GTGTGGCTTG ACCCATCTGG TGTGCAGCTT
TACTCAAACC TTTCGTACCA GCCTTGGGAT GTGCGGTTAG GGCTGGCCAC TGGTATTTCC
CAGCAATTGC TCACTTATGT CAGCGGACAC GCGCAGGATA AGCAGCAAAC AATCAAGGTC
GAGGAGCTAC AAGCGCTTTT CGGCTACAAC GGCCCAACGT CGAGATTTGT GCGGGCGTGT
AAAAGTGCGC TCAAAGAACT GGAGGTAGGT GGAATTATCG TGGAGGGGAC GAGTAAAGTG
GCGACAGCTC GAGACCCGGA CACGCGCCAG CCGATTCAGC GGTTTGTCTG GAGGCGCACG
GCGAAGAAGC AAAGCAATAT CGAATGCGGT CTGGATCTGG GCGTGGAATT TGATGCTGGA
GTCGTAGAAG CAGAGACGGA AACGGCGGCG GTAGATGACG AATCCTGGGG CGATATTTGA
 
Protein sequence
MSALEDYEAR EERAEREAAA EMRACAAHKV AMAVQAEVPA SVADYAPAAA ERDEALLKKV 
LHQTRRVPAG MAFLPTELTR AGLIRSPANS NDRPELVKQE LAMGRGIQSL VYTGPELGPK
EETAWLAVLM LARTQMLGTR IYFKIAELLK ICGLNDSADN FVAMRMRLSR LSQAHFSIDY
TRKVAGKSRK FHVETHLLGF EIEQETGDTV VWLDPSGVQL YSNLSYQPWD VRLGLATGIS
QQLLTYVSGH AQDKQQTIKV EELQALFGYN GPTSRFVRAC KSALKELEVG GIIVEGTSKV
ATARDPDTRQ PIQRFVWRRT AKKQSNIECG LDLGVEFDAG VVEAETETAA VDDESWGDI