| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3072 |
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| Symbol | |
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| ID | 3962636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3398143 |
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| End bp | 3401043 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637917892 |
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| Product | endonuclease |
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| Protein accession | YP_524313 |
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| Protein GI | 89901842 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.955315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTAC CCGACAAGTC CTTGCTGCCC GTTATCAACA TGGCTCAACT GATGCTCGAG
GCTGAGCGCG ACACGGTTGG CATTACCCCC GCGTCCATCG CAGCCAAGGT GAAGCTCGCC
GCCCAAATCT TGAACGCGCC GGATAGCGAT CAGGACATGG CAATCTCAAC CCTGATTCAA
CGATTCAGCC ACTGGATCGG CAAGGACTCC ACGCTGCAGG ACACTGAGGG ACACGTCGCT
TGGCTTGTCT CGGCACGCAA GAAGGACTGG CGGTATTGGC CGCGATATCA AACCTATTTG
GAGCGCAAAT TGTCGGTGGA TGTTGTCGGC GCGCTCGACG AATCCACCGA TCACATACTT
GGGATGCTGG AAGACCCCAA GCGCGATGGA TCGTGGGACC GTCGGGGCCT CGTCGTGGGG
CACGTGCAGT CGGGCAAGAC CGGGAACTAT TCCGGTCTTG TGTGCAAGGC CGCCGATGCG
GGCTACAAGA TCATCATCGT CTTGGCGGGC ATGCACAACA ACCTGCGGTC CCAAACCCAA
ATCCGTCTTG AAGAAACCTT CCTGGGTTAC GAGACCTCCG AAGACCGAAT TCCTGGCAAG
CCGCTAGGCG TTGGCGAAAT CGACAGCGAC ACCGCAATCG CTCCACACTG CGCAACGACA
CGGGCCGACA AGGGAGACTT CAACGCGACC GTCCAGCGGC ACTTTGCCAT ATCTCCCGAA
GAGAAGCCGT GGCTTTTCGT GGTCAAGAAG AACAAGACCG TTCTCACACA GCTCTTGAAG
TGGATTCGGA ACCATGTCGC CGACAGCAAG GACAACGCGA CGGGACGGCG CATCGTCACC
AAAAGGCCAC TGCTGATCAT CGACGACGAG GCTGACAACG CCTCCGTCGA TACCGGCGAG
CAAGTCATTG ATTCCGACGG CAAACCCAAT GACGACCATC AACCCAAAGC CATCAATGGG
CTGATTCGCA GCATTCTGCA TTCCTTTGAC AAGAAGGCCT ACGTCGGCTA CACCGCCACG
CCATTCGCGA ATATCTTCAT CCATCGCAAG AACGCGACCA CCGACGAGGG GCCTGACCTT
TTTCCCCAAT CCTTCATCGT GAACTTGGCC GCGCCTTCCA ACTACGTCGG CCCGGCCCGC
GTCTTTGGCC TTCTGACACC GGATGGCCGT GTCGGAGGCC TGCCTTTGAT GCGCAACGTG
TCCGACCATT TCACCGCTCC CGATCCGAAT TCAGCAGACG AACCAAGTGG ATGGATGCCG
CCAAAGCACA ACAAGGAACA TGTCCCCGTT GTCAATGGAC AGGAGATCAT TCCTCCATCG
CTCAAAGAAG CCATTCACTC CTTCGCTCTC GCTTGCGCCA TCAGGACTTT GCGGGGGCAA
GGGAGGGAAC ACTCATCCAT GCTGATCCAC GTCACCCGAT TTGCCAATGT GCAAAAGGAG
GTGTTTGGGC AAGTGGACGA GACCGTCAAG AAGATGGTCC AACGGCTGAC GCGGCGAATC
GACCATGAGA CCCTTGTTGA AGAGCTGCGG TCGCTATGGG AGCGGGACTT TGTCCCGACT
TCGGCCACGG TCGCCCAATT GCTCGAAGAG CCTGGAGAGT CGAAGCTCGC ACCGGATTGG
CCCGCGATCC TCGCTGCGCT TCCGGATGCG GTCTCCGACA TCAAGGTCAA AACCATCAAC
GGAACCGCCA AGGATGCCCT CGACTATTTG GAACAGGAAG AGCACGGTTT GAAAGTGATC
GCCGTCGGCG GAGACAAGCT CGCGCGTGGG TTGACGCTGG AAGGACTCTG CACAAGCTAC
TTCGTTCGGA CCACCAAGAT GTATGACACG CTGATGCAGA TGGGCCGATG GTTTGGCTAC
CGTCCCGGAT ATGTGGACCT TTGCCGCCTC TATACAACCG AAGACTTGGT CGAATGGTTC
GGCCATATCG CCGACGCATC CGAAGAACTA AGAGAGGAAT TCGACGCCAT GGCTGAGAGC
GGAGCGACGC CAAAGGAATA CGGATTGAAG GTCCAATCTC ATCCTGTTCT GTTGGTTACC
TCACCATTGA AAATGCGCAC CGCCAAGAGC CTGCAGCTTT CTTTCAGCGG AGAACTTCTC
GAGACCATCG CCTTTTTCAA GGATGACGCC AGGCTCGACC AAAACCTCAC GGTCACCAAC
CGACTCATCG CAGCCATGCA AAAGCCGTCC GAGGTCAACC CTGTAAGGCG ACGCGCCGGA
GTTGACCAGC CAACAAATGG CTTCCTATGG AACGCGGTGC CAGCGGAACA TGTGGCGGAT
TTTCTCGAAT CCTATGTGAC GCATCCAAAG GCGCGAAAAG TCAACAGCAA ATTGCTTGCT
GAGTTCGTAA GGGAAATGGT TTCCAAATCC GCAGAGCTCA CAAGCTGGAC GGTCGCGCTG
ATCGGCGGAG GCAGAGGGCC TGAATTCACA TTCGATGGCG GCCTGACCGT CGATGGAACG
CTTCAACGCT CCGCCGACCC GGATGTCAAA GAACGTTATT CCATCGGAAG ACTATTGTCC
CCACGCGACG AAGCGATTGA TCTGGACGGC CCGGCATGGT CAGCAGCCCT GGCCGCTACG
AAACGAGCCT GGAAGCCCGA TCCAGCCAAG CAATCGGCGG GTGTGGTTCA AAAAGAGCCA
GAAGTGCCCA ATGGACCCGC GATCCGACGC GTGCGCGGCA AAGGAGCCGA CGGAGTGCAA
AGCGCGCCCG AGCGGGGCGT GCTGCTCTTG TATCCCCTTG ATCCCAAATT GGCGGGTGCT
GGCGTCTTCC CCGACCGAAC GAAACCCATC ATGGGATTCG GGGTGAGCTT TCCATCCAGC
GAATCGGGCG TGAAAGTCGA ATACAAAGTT GATCACCTCA TCTGGGGACA ATGGGAGCTG
GAATATGGCG CATCCGAGTG A
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| Protein sequence | MPLPDKSLLP VINMAQLMLE AERDTVGITP ASIAAKVKLA AQILNAPDSD QDMAISTLIQ
RFSHWIGKDS TLQDTEGHVA WLVSARKKDW RYWPRYQTYL ERKLSVDVVG ALDESTDHIL
GMLEDPKRDG SWDRRGLVVG HVQSGKTGNY SGLVCKAADA GYKIIIVLAG MHNNLRSQTQ
IRLEETFLGY ETSEDRIPGK PLGVGEIDSD TAIAPHCATT RADKGDFNAT VQRHFAISPE
EKPWLFVVKK NKTVLTQLLK WIRNHVADSK DNATGRRIVT KRPLLIIDDE ADNASVDTGE
QVIDSDGKPN DDHQPKAING LIRSILHSFD KKAYVGYTAT PFANIFIHRK NATTDEGPDL
FPQSFIVNLA APSNYVGPAR VFGLLTPDGR VGGLPLMRNV SDHFTAPDPN SADEPSGWMP
PKHNKEHVPV VNGQEIIPPS LKEAIHSFAL ACAIRTLRGQ GREHSSMLIH VTRFANVQKE
VFGQVDETVK KMVQRLTRRI DHETLVEELR SLWERDFVPT SATVAQLLEE PGESKLAPDW
PAILAALPDA VSDIKVKTIN GTAKDALDYL EQEEHGLKVI AVGGDKLARG LTLEGLCTSY
FVRTTKMYDT LMQMGRWFGY RPGYVDLCRL YTTEDLVEWF GHIADASEEL REEFDAMAES
GATPKEYGLK VQSHPVLLVT SPLKMRTAKS LQLSFSGELL ETIAFFKDDA RLDQNLTVTN
RLIAAMQKPS EVNPVRRRAG VDQPTNGFLW NAVPAEHVAD FLESYVTHPK ARKVNSKLLA
EFVREMVSKS AELTSWTVAL IGGGRGPEFT FDGGLTVDGT LQRSADPDVK ERYSIGRLLS
PRDEAIDLDG PAWSAALAAT KRAWKPDPAK QSAGVVQKEP EVPNGPAIRR VRGKGADGVQ
SAPERGVLLL YPLDPKLAGA GVFPDRTKPI MGFGVSFPSS ESGVKVEYKV DHLIWGQWEL
EYGASE
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