Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3035 |
Symbol | |
ID | 3961010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3349544 |
End bp | 3351988 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917855 |
Product | UvrD/REP helicase |
Protein accession | YP_524277 |
Protein GI | 89901806 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGTGGTC ATTGGTCCGC TTTCTACAAT CGGGCTATGT TCTCTGCAAT TACACAACAA AGCCCCCCGG ACGATCTTCT GCTGCAGCAC CTTAACCCCG AGCAGCGTGC GGCTGTGACG CTGCCGGCCG AGCATGCCCT GATTCTGGCC GGGGCCGGCT CCGGCAAGAC CCGGGTGCTG ACCACCCGCA TTGCCTGGCT GCTGCAAACC GGGCAGGTGA CGCCCGGCGG CGTGCTGGCC GTGACTTTCA CCAACAAGGC CGCCAAGGAG ATGATGACGC GCCTCTCCAG CATGTTGCCG GTCAACGTGC GTGGCATGTG GATTGGCACC TTTCATGGTC TGTGCAATCG CTTCTTGCGG GCGCATTTCA AGTTGGCCAA TCTGCCGCAG AGCTTTCAGA TACTGGACAC GCAGGATCAG CTGTCAAGCA TCAAGCGCCT GTACAAGCAG TTTGGCATTG ATGACGAGCG CTTTCCGCCC AAGCAGATGC AATGGTTCAT TGGCGGCTGC AAGGAAGATG GGCTGCGCCC GAACATGGTG GAAGTGCGCG ACGAGGAAAC CCGTAAAAAG GTTGAGATCT ACCAGCTGTA TGAAGACCAG TGCCAGCGCG AAGGCGTGGT TGATTTTGGC GAACTGATGC TGCGCAGCTA TGAGGTGCTG CGCGACAACG ACCCGATTCG CGAGCACTAC CAGCGGCGCT TTCGCCACAT CCTGATCGAC GAGTTTCAGG ACACCAACAA GCTGCAATAT GCGTGGATCA AGATGCTGGC AGGCACCGGC GCGCACAGCA CGGCCGACGA TGCCAGCTTC AACCCGACCG GCTGTGTGCT GGCGGTGGGT GACGATGACC AGAGCATCTA CGCCTTTCGC GGTGCAAGGG TGGGCAATAT GGCTGACTTT GTGCGCGAGT TCAAGGTCAA ACACCAGATC AAGCTGGAGG AGAACTTCCG CAGCGGCAGC AATATCCTGG ACTCCGCCAA CGAGCTCATC AGCTACAACA CCAAACGGCT GGGCAAGAAC CTGCGCACCG CCCAAGGCCC CGGCGAGCCG GTGCGGGTGT TTGAAGCCAC CAGTGACTTT GCCGAAGCGC AGTGGATGGT GGAGGAGATG CGGCAACTGG TGCGCGAGGG CATGGAGCGC AAGGAAGTTG CCGTGCTGTA CCGCAGCAAT GCGCAAAGCC GGGTCATCGA GACCGCCTTG TTCAACGCCG GCATACCGTA CAAGGTGTAT GGGGGCTTGC GCTTTTTTGA GCGCGCTGAA ATCAAGAATG CGCTGGCTTA CCTGCGCTTG CTGGAGAACC CGCGTGATGA CACCAGTTTC CTGCGCGCCG TGAATTTCCC GCCGCGCGGC ATTGGTCTGC GCAGTCTGGA GCAGCTGCAG GACGTGGCGC GCGCCAGCGG CTGTTCGCTC AGCGACGCGG TCAGCGGCCT GGGCGGCAAG GCAGGCGCCA ACATTGGCGC CTTCTTGGCC GGCATCGACG TCTTGCGCGA GCAGACATCC GGCATGAAAT TGAGTGAGAT TGTCGAGCGG GTGTTGGAGC ACAGCGGACT GATTCAGCAT TACAAAGCCG ACCGCGAAGG CGCGGACCGG GTGGAGAATC TGGAAGAGCT GGTCAACGCG GCCGAGAGCT TTGTCTCGCT GGAAAACTTT GGCCGTGATG CCGCGGCCTT GCCGGTCGAT GAACAGGGCC ACGCCTTGAC CCAATCGCCA GCGTCGCAGG GGTTGGACCT CAGTCAGCCA GTGCTTGACG AGCCGGTGCC GGATCTTGAG ACCGGCGAAA CCCAGTCGCC GCTGGCGGCG TTTTTGTCCC ATGCGGCGCT GGAGGCGGGC GACAACCAGG CCCAGGCGGG GCAGGACGCC ATCCAGCTCA TGACGGTGCA TTCCAGCAAA GGCCTGGAGT TTGACTGTGT CTTCATCACC GGCATCGAAG AAGGCCTGTT CCCGCACGAA AACTCGATGA GCGACCGCGA CGGTCTGGAG GAAGAGCGGC GCCTGATGTA CGTCGCGATT ACCCGCGCGC GCAAGCGGCT GTACCTGAGC CATTCACAAA CCCGCATGCT GCATGGGCAG ACGCGCTACA ACCCGAAGAG CCGGTTTTTT GACGAGTTGC CGGAAGCGGC ACTGAAGTGG ATCACGCCGA AGCATCAGGG CTTTCGCGCT GATGGTGCTA CGTATTCAGG AGCTAATAGC CAAGGATACA CGGGGGCTAG AGGCCAATTT GATATAAATT ACTCTAAATT CGCGGCAGCC CCGGCGCCGA TTCAAAAAGC AGCTCCGGCG CATGGTTTGC GCGCCGGCAT GAAGGTTTTT CACGCCAAAT TTGGCGAAGG CACGGTACAA ACCCTGGAAG GCACCGGTGA CGACGCCCGG GCCCAAATCA ACTTCCCGCG CCATGGCGTG AAATGGCTGG CGCTGAGTGT GGCCAAGCTC ACGCCAGTGC CTTAG
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Protein sequence | MCGHWSAFYN RAMFSAITQQ SPPDDLLLQH LNPEQRAAVT LPAEHALILA GAGSGKTRVL TTRIAWLLQT GQVTPGGVLA VTFTNKAAKE MMTRLSSMLP VNVRGMWIGT FHGLCNRFLR AHFKLANLPQ SFQILDTQDQ LSSIKRLYKQ FGIDDERFPP KQMQWFIGGC KEDGLRPNMV EVRDEETRKK VEIYQLYEDQ CQREGVVDFG ELMLRSYEVL RDNDPIREHY QRRFRHILID EFQDTNKLQY AWIKMLAGTG AHSTADDASF NPTGCVLAVG DDDQSIYAFR GARVGNMADF VREFKVKHQI KLEENFRSGS NILDSANELI SYNTKRLGKN LRTAQGPGEP VRVFEATSDF AEAQWMVEEM RQLVREGMER KEVAVLYRSN AQSRVIETAL FNAGIPYKVY GGLRFFERAE IKNALAYLRL LENPRDDTSF LRAVNFPPRG IGLRSLEQLQ DVARASGCSL SDAVSGLGGK AGANIGAFLA GIDVLREQTS GMKLSEIVER VLEHSGLIQH YKADREGADR VENLEELVNA AESFVSLENF GRDAAALPVD EQGHALTQSP ASQGLDLSQP VLDEPVPDLE TGETQSPLAA FLSHAALEAG DNQAQAGQDA IQLMTVHSSK GLEFDCVFIT GIEEGLFPHE NSMSDRDGLE EERRLMYVAI TRARKRLYLS HSQTRMLHGQ TRYNPKSRFF DELPEAALKW ITPKHQGFRA DGATYSGANS QGYTGARGQF DINYSKFAAA PAPIQKAAPA HGLRAGMKVF HAKFGEGTVQ TLEGTGDDAR AQINFPRHGV KWLALSVAKL TPVP
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