| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3028 |
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| Symbol | |
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| ID | 3961003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3342906 |
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| End bp | 3344426 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917848 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_524270 |
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| Protein GI | 89901799 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.287974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATT TGATGACTGA ACTGACCCCC GATACCCTTC CCATGGCCTT TGCCCAGTTG
CAGCTCGCCG CCCCTTTGGC GCGCGCCGTG GCCGACATGG GATACGAGAC CATGACACCG
ATTCAGGCGC AGGCCATTCC AGTGGTGCTG CAGGGCCGTG ACGTGATGGG CGCGGCCCAG
ACCGGGACCG GCAAGACAGC CGCTTTTGCC CTGCCTTTGC TGCAGCGCAT GCTCAAGCAC
GAAAACAGTT CGACCTCACC GGCCCGCCAT CCGGTGCGCG CCTTGGTGCT GCTGCCCACG
CGTGAGCTGG CCGACCAGGT GGCGCAAGCG ATTAAAGACT ATGCCGTCCA TACCAATCTG
CGTAGCGCGG TTGTTTTTGG CGGTATGGAC ATGAAGCCCC AGACGCTGGA ATTGAAAAAA
GGCGTTGAAG TGCTGGTGGC CACGCCCGGG CGGCTGCTGG ACCACATCGA AGCCAAGAAT
TGCGTGCTGA ACCAGGTGGA ATATGTGGTG CTCGATGAGG CCGACCGCAT GTTGGACATC
GGCTTTTTGC CCGATCTGCA ACGCATCCTG AGCTATTTGC CCAAGCAGCG CATCACCTTG
CTGTTCTCGG CCACGTTTTC GTCCGAGATC AAACGCCTGG CCAGCAGCTA TCTGCAAGAC
CCGGTGACGA TTGAAGTCGC ACGTTCCAAC GCTGCTGCTT CCACCGTGGA GCAGCATTTT
TACAGCGTTG ATGCGGATGA CAAGCGTCAT GCCTTGCACC AGATACTGAA ATCACGCGGC
ATGAAGCAGG CCTTTGTGTT TGTCAACAGC AAACTCGGCT GCGCCCGCCT GGCCCGCTCG
CTTGAGCATG AAGGCCTGAA AACCACGGCG CTGCATGGCG ACAAGAGCCA GGATGAGCGC
TTGAAAGCCC TCGAAGCTTT CAAAAGCGGC GAGGTTGATT TGCTGGTGTG CACCGATGTG
GCGGCGCGCG GACTCGACAT CAAGGATGTG CCCGCCGTCT TCAACTTTGA TATTCCCTTC
AACGCGGAAG ACTATGTGCA CCGCATTGGT CGCACCGGGC GCGCCGGCGC TGCTGGCCTG
GCCGTCAGTT TTGTGGCCAA GAGCGACATT CGGTTGGTGG CGGATATTGA GAAACTGCTC
AATACCAAAA TTGAACTTGA AGCCGTTGAA TATGATGAAG ATGTGCCCGA CATTCGCAAG
CAGGGCCGCA TCAACGACGG CCATCGCATG TATGCCGAAG GCGCGCAGAA TGACTCCCGC
CATGGCGCCC ATCGGTCGGG CTCGCTGCGC GACGTGGCCC ATGAAGGCCA ATATGCCCGG
CCGGAGCGGC CACCCCGGCG GGATTTCACA CGACCGCTGT CGGCGCCGCG CGACCCGTTT
TTTGACAAGC CCTACGAACC TGCGGTGGTT GCCGCGGAAG CACCGTCCTG GGAGGCCGCT
GCGACTCGGC AGGGTGGGCG CAGCGCGTCT GCCAACATCA AGCCCAAGCG CCGGGTTGCA
GCGCTGTTCA AGTCGGCATA G
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| Protein sequence | MTDLMTELTP DTLPMAFAQL QLAAPLARAV ADMGYETMTP IQAQAIPVVL QGRDVMGAAQ
TGTGKTAAFA LPLLQRMLKH ENSSTSPARH PVRALVLLPT RELADQVAQA IKDYAVHTNL
RSAVVFGGMD MKPQTLELKK GVEVLVATPG RLLDHIEAKN CVLNQVEYVV LDEADRMLDI
GFLPDLQRIL SYLPKQRITL LFSATFSSEI KRLASSYLQD PVTIEVARSN AAASTVEQHF
YSVDADDKRH ALHQILKSRG MKQAFVFVNS KLGCARLARS LEHEGLKTTA LHGDKSQDER
LKALEAFKSG EVDLLVCTDV AARGLDIKDV PAVFNFDIPF NAEDYVHRIG RTGRAGAAGL
AVSFVAKSDI RLVADIEKLL NTKIELEAVE YDEDVPDIRK QGRINDGHRM YAEGAQNDSR
HGAHRSGSLR DVAHEGQYAR PERPPRRDFT RPLSAPRDPF FDKPYEPAVV AAEAPSWEAA
ATRQGGRSAS ANIKPKRRVA ALFKSA
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