| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3026 |
|---|
| Symbol | |
|---|
| ID | 3961001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3340683 |
|---|
| End bp | 3342011 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637917846 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_524268 |
|---|
| Protein GI | 89901797 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.25014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCT TGTTAATCGC CTTTCTGACC CTGCTCAATG GCGTGTTCGC CATGTCGGAG
CTGGCTTTGG CCGCCAGTCG CAAAGTGCGG CTCACAACCA TGGCTGAAGC AGGTGACAAA
GGCGCGCACG CTGCGTTGAC GCTGCTGGAG AACCCGAATC AATTTTTATC TACCGTGCAG
GTCGGCATCA CGTCCATCGG CGTGCTCAAC GGCATTGTGG GCGAGGCGGC CTTCAGCGCC
GGTGTGGCCG CCTGGCTGCA CGGCTGGGGC GTCGCCGACA AAGCCGCTGC CATTTCAGCC
ACCGCGATTG TGGTCACCTT GATCACCTTC ATCACCATCA TTTTTGGTGA GTTGGTGCCC
AAGCGCATTG GCCAGTTGCA CCCGGAAATC GTGGCGCGCT GGGTGGCGCG GCCGATGGTG
TGGTTGGCCA CCGCCGCTGG GCCTTTTGTG AACCTGCTCT CGGGCACCAC CGCGGCAGTT
CTCAAGTTGT TGCGCATTGA CACGACCGGC GCGCGCTCCG TGACCGAAGA AGAAATCACG
GCCAGTCTCG AAGAAGGTGT CGACGCCGGC GTGATCGAGC AGCATGAGCA CCAGATGGTG
CAAAACGTAT TTCGGCTCGA TGACCGGCCG CTGACGTCGC TGATGGTGCC GCGTACGGAT
GTGGAATGGC TGGATGCCTC CAATACGGTG GCCGACAGCC TCAAGCTGGC CGGCTCGGGT
GGCGAACGAG GGGCCCATTC CTGGTACCCG GTGTGCCGTG GCTCGCTCGA TGACGTGGTG
GGCAAGATCA GCGTGGCGCG GTTGCTGCAA CTTGGCGCTG ACACACCGGG CACGATTGAG
GCCTATATCA CCCCCGCCAC TTTTGTGCCT GAGACGCTCA GTGGCATGGA GTTGCTGGAG
CAGTTTCGCG CCAAAGCCGG CCGCTTTGTG CTGGTGGTCG ATGAGTACGG GGTGGTGCAG
GGTTTGCTGA CACCCCGCGA TTTGCTGGAG GCCATCACGG GTGAACTGCA GCCGGGTGCG
CAGATTGATG CCTGGGCCAC GCAGCGCGAC GATGGTTCGT GGCTGCTCGA TGGCCTGATG
CCGGTGAGCG AACTCAAGGT TCGCCTGGCG ATTGATGACC TGCCAGAAGA AGACCGCGGC
CGCTACAACA CGGTGGCGGG CTTGCTGATG TCCGTGTCGG GCCACTTGCC GTCGGTCGGC
GAGCGCATTA CCTGCGCCGA ATGGCAGTTT GAAGTGCTGG ACCTCGACGG CAAGCGCATT
GACAAGGTGC TGGCCACGCC GCTGGCTGCC TGCGCGCAGC CGGGTCAGGT TATGCCTGGC
CGTGTGTGA
|
|---|
| Protein sequence | MEILLIAFLT LLNGVFAMSE LALAASRKVR LTTMAEAGDK GAHAALTLLE NPNQFLSTVQ
VGITSIGVLN GIVGEAAFSA GVAAWLHGWG VADKAAAISA TAIVVTLITF ITIIFGELVP
KRIGQLHPEI VARWVARPMV WLATAAGPFV NLLSGTTAAV LKLLRIDTTG ARSVTEEEIT
ASLEEGVDAG VIEQHEHQMV QNVFRLDDRP LTSLMVPRTD VEWLDASNTV ADSLKLAGSG
GERGAHSWYP VCRGSLDDVV GKISVARLLQ LGADTPGTIE AYITPATFVP ETLSGMELLE
QFRAKAGRFV LVVDEYGVVQ GLLTPRDLLE AITGELQPGA QIDAWATQRD DGSWLLDGLM
PVSELKVRLA IDDLPEEDRG RYNTVAGLLM SVSGHLPSVG ERITCAEWQF EVLDLDGKRI
DKVLATPLAA CAQPGQVMPG RV
|
|---|
| |