Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3026 |
Symbol | |
ID | 3961001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3340683 |
End bp | 3342011 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637917846 |
Product | hypothetical protein |
Protein accession | YP_524268 |
Protein GI | 89901797 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.25014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCT TGTTAATCGC CTTTCTGACC CTGCTCAATG GCGTGTTCGC CATGTCGGAG CTGGCTTTGG CCGCCAGTCG CAAAGTGCGG CTCACAACCA TGGCTGAAGC AGGTGACAAA GGCGCGCACG CTGCGTTGAC GCTGCTGGAG AACCCGAATC AATTTTTATC TACCGTGCAG GTCGGCATCA CGTCCATCGG CGTGCTCAAC GGCATTGTGG GCGAGGCGGC CTTCAGCGCC GGTGTGGCCG CCTGGCTGCA CGGCTGGGGC GTCGCCGACA AAGCCGCTGC CATTTCAGCC ACCGCGATTG TGGTCACCTT GATCACCTTC ATCACCATCA TTTTTGGTGA GTTGGTGCCC AAGCGCATTG GCCAGTTGCA CCCGGAAATC GTGGCGCGCT GGGTGGCGCG GCCGATGGTG TGGTTGGCCA CCGCCGCTGG GCCTTTTGTG AACCTGCTCT CGGGCACCAC CGCGGCAGTT CTCAAGTTGT TGCGCATTGA CACGACCGGC GCGCGCTCCG TGACCGAAGA AGAAATCACG GCCAGTCTCG AAGAAGGTGT CGACGCCGGC GTGATCGAGC AGCATGAGCA CCAGATGGTG CAAAACGTAT TTCGGCTCGA TGACCGGCCG CTGACGTCGC TGATGGTGCC GCGTACGGAT GTGGAATGGC TGGATGCCTC CAATACGGTG GCCGACAGCC TCAAGCTGGC CGGCTCGGGT GGCGAACGAG GGGCCCATTC CTGGTACCCG GTGTGCCGTG GCTCGCTCGA TGACGTGGTG GGCAAGATCA GCGTGGCGCG GTTGCTGCAA CTTGGCGCTG ACACACCGGG CACGATTGAG GCCTATATCA CCCCCGCCAC TTTTGTGCCT GAGACGCTCA GTGGCATGGA GTTGCTGGAG CAGTTTCGCG CCAAAGCCGG CCGCTTTGTG CTGGTGGTCG ATGAGTACGG GGTGGTGCAG GGTTTGCTGA CACCCCGCGA TTTGCTGGAG GCCATCACGG GTGAACTGCA GCCGGGTGCG CAGATTGATG CCTGGGCCAC GCAGCGCGAC GATGGTTCGT GGCTGCTCGA TGGCCTGATG CCGGTGAGCG AACTCAAGGT TCGCCTGGCG ATTGATGACC TGCCAGAAGA AGACCGCGGC CGCTACAACA CGGTGGCGGG CTTGCTGATG TCCGTGTCGG GCCACTTGCC GTCGGTCGGC GAGCGCATTA CCTGCGCCGA ATGGCAGTTT GAAGTGCTGG ACCTCGACGG CAAGCGCATT GACAAGGTGC TGGCCACGCC GCTGGCTGCC TGCGCGCAGC CGGGTCAGGT TATGCCTGGC CGTGTGTGA
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Protein sequence | MEILLIAFLT LLNGVFAMSE LALAASRKVR LTTMAEAGDK GAHAALTLLE NPNQFLSTVQ VGITSIGVLN GIVGEAAFSA GVAAWLHGWG VADKAAAISA TAIVVTLITF ITIIFGELVP KRIGQLHPEI VARWVARPMV WLATAAGPFV NLLSGTTAAV LKLLRIDTTG ARSVTEEEIT ASLEEGVDAG VIEQHEHQMV QNVFRLDDRP LTSLMVPRTD VEWLDASNTV ADSLKLAGSG GERGAHSWYP VCRGSLDDVV GKISVARLLQ LGADTPGTIE AYITPATFVP ETLSGMELLE QFRAKAGRFV LVVDEYGVVQ GLLTPRDLLE AITGELQPGA QIDAWATQRD DGSWLLDGLM PVSELKVRLA IDDLPEEDRG RYNTVAGLLM SVSGHLPSVG ERITCAEWQF EVLDLDGKRI DKVLATPLAA CAQPGQVMPG RV
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