Gene Rfer_3022 details

Gene Information

• Locus tag: Rfer_3022
• ID: 3960369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 3334617
• End bp: 3336731
• Gene Length: 2115 bp
• Protein Length: 704 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637917842
• Product: putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane
• Protein accession: YP_524264
• Protein GI: 89901793

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0965207
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTACGA CAAACAGAAA CAACTTGAAG TTAACGGCAC TGACCGCCGC CGTACTGACA 
CTCAGCGCCT GCGGTGGGAG CGATGCCGTT GCCGAAAATA AAAATGTCAA GCCGGCCTAT 
CTGGGCGAAG TCGCTAGCGC CAGCTACGAC GGCATCAGCG ACGACCTGCT CACAGCCGGC 
CTTGGCAAAA CTGGTTTGGG TGGGGCGGCC CCAGCCGTGG TGGACCCTTT GAGCCCGACG 
TCCGCCGAAC TGCGCAAACT TGCCATTTTC AACAACTACC GCGCCATCCT CGACATTACC 
GCGGGCGGCG GCTATGGCAC CCTGTATGGC CCCAATGTCG ATGCCAAAGG CGTCGTGGGC 
GCCAGTGAAG GCATGATTGC AGGCACCGAA TATATTGCCT ACTCCGATGA CGGCACGGGG 
CGCCAAAACA TCACCATGAT GGTGCAGGTG CCCGCCACGT TCAACCCGGC CAGCCCCTGC 
ATTGTTACCG CGACCTCCAG CGGATCGCGC GGCGTTTACG GCGCCATTGG TTCGTCAGGC 
GAGTGGGGCT TGAAAAACGG CTGCGCCGTG GCCTATACCG ACAAGGGCAC CGGCACCGGT 
ATTCACGACC TCCAGAACGA TACGGTCAAT GTACAAAACG GCGGCCGCGC AAGTGCAACT 
GCGGCTGGAA AGGCATCGAT CTTTACCGCC TTGCTGACTT CCATCGAACG CGCGGCGTTC 
AACTTGGCAA CGCCGAATCG TTTCGCCATC AAGCATGCGC ATTCGCAACA AAACCCCGAA 
AAGGACTGGG GCAAATGGAC CCTGCAATCG GTTGAGTTTG CGTACTTTGT CCTGAATCAA 
AAATACGGCG ATCTGGCCTC CGATGGCGTG GCGCATCTTA AAAAGCTGAC ACCGGCCAAC 
ACCATCGTGA TCGCCTCCAG CGTGTCCAAT GGCGCTGGCG CGGCACTGGC TGCGGCGGAG 
CAGGACACGC AAGGCCTGAT CAGCGGCGTG GCGGTGGCCG AGCCCGAGGT CCAGCTGGCC 
CCCGATGCCC GCCTGAGCAT CGTGCGCGGC ACCACCACCC TGGTCGGCAC CGGCAAGCAG 
TTGCTCGACT ATTTCACGCT GGCCAATTTG CTGCAGCCGT GCGCCGCGCT GGTGTCGCCC 
AGCACCAATG TGTTCAACAC GGTCAACGCG GCGATTGCGG GCAACCGCTG CAGCGCCCTC 
AAGGCCAACG GCCTGATCAC CGGCACCACA ACGGCCGAGC AGGCCGCCAG TGCCATGGCC 
GCGTTGGTCG CGGCAGGCTG GCAGCCCGAG AGCAGCGACC TGCAGGCCTC GCACTACTCG 
TTCGCCACCT TGCCGGTCGC GTTGACTTAC GCCAACACCT ATGGTCGGTT CGGCGTCGCC 
GACAACCTGT GCGGCTTCAG TTACGCGGCC ACTGGTGCGG CAACATCGGC GACCCCGCTG 
GCGCCGGTTC CCGCTTCCGC TGCTGTGCTG GCCACTTCGT TTGGCACCTC TAACGGCGTG 
CCGCCAACCG CTGGCATCAA CATCGTCAAC AACAACAGTG TGGGCGGGCC TTTGCTGGAT 
GCTGCCTCGT TGTCAGTGGG GGGGGTGCAG GACTACAACA TCGCCGGCGC ACTGTGCCTG 
CGCGGGCTGG TCACTGGCAC CAGTGCCAAC GCCGTGCGGG TCCAGCAGGG GATGAGCGAA 
GTGTTGCGTA GCGCCAATCT GCACGGCAAA CCAGCGCTGA TCGTGCAAGG CCGCAGCGAC 
ACGCTGCTGC CGGTGGCCTT CACCGGGCGG CCCTATTTCG GCATGAACAA GATCGTGGAA 
GGCGCCAATA GCAGACTGTC CTACATTGAA GTGACCAATG CCCAGCATTT TGATGCCTTC 
CTGGGATTCC CCGGTTATGC CAATCGTCTG GTGCCCTTGC ATCGGTACTT CATCCAGGCG 
ATGGACATGA TGTACGCCAA CCTGAAAACC GGCGCCGCAC TGCCGACCAG CCAGGTGGTT 
CGCACCGTGC CGCGCGGTTT GGCGGGCACG GCTGCCAACC CGATCACCGC CGCCAATGTG 
CCGCCGATCA AGGCCGTGGC CGATGTGGCG GATCAGATCA CCTTCGCCAA CAACGTGGTG 
ACCGTGGCCG ACTGA 

 

Protein sequence

MTTTNRNNLK LTALTAAVLT LSACGGSDAV AENKNVKPAY LGEVASASYD GISDDLLTAG 
LGKTGLGGAA PAVVDPLSPT SAELRKLAIF NNYRAILDIT AGGGYGTLYG PNVDAKGVVG 
ASEGMIAGTE YIAYSDDGTG RQNITMMVQV PATFNPASPC IVTATSSGSR GVYGAIGSSG 
EWGLKNGCAV AYTDKGTGTG IHDLQNDTVN VQNGGRASAT AAGKASIFTA LLTSIERAAF 
NLATPNRFAI KHAHSQQNPE KDWGKWTLQS VEFAYFVLNQ KYGDLASDGV AHLKKLTPAN 
TIVIASSVSN GAGAALAAAE QDTQGLISGV AVAEPEVQLA PDARLSIVRG TTTLVGTGKQ 
LLDYFTLANL LQPCAALVSP STNVFNTVNA AIAGNRCSAL KANGLITGTT TAEQAASAMA 
ALVAAGWQPE SSDLQASHYS FATLPVALTY ANTYGRFGVA DNLCGFSYAA TGAATSATPL 
APVPASAAVL ATSFGTSNGV PPTAGINIVN NNSVGGPLLD AASLSVGGVQ DYNIAGALCL 
RGLVTGTSAN AVRVQQGMSE VLRSANLHGK PALIVQGRSD TLLPVAFTGR PYFGMNKIVE 
GANSRLSYIE VTNAQHFDAF LGFPGYANRL VPLHRYFIQA MDMMYANLKT GAALPTSQVV 
RTVPRGLAGT AANPITAANV PPIKAVADVA DQITFANNVV TVAD