| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3019 |
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| Symbol | |
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| ID | 3960366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3329895 |
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| End bp | 3331106 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917839 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_524261 |
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| Protein GI | 89901790 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.456959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTGGA CAGCAGTCGA GGCCATGGAA TTTGACATGC CCCTTTTCCT TTATTGGAGT
TCGCTGATGA CGACCGCGCT TGAGAGCCTT CTGAAAACCC CGCTCAACGA CCTGCATGTG
TCTCTCGGCG CCCGCATGGT GCCCTTTGCC GGCTATTCCA TGCCGGTGCA GTACCCGGCA
GGCCTGATGT TTGAACACAA ACATACGCGC ACCGCCGCAG GCCTGTTTGA CGTGTCCCAC
ATGGGCCAGT TGCGCCTGGT CGGGCCGGAC GCTGGCGCCG CGTTGGAGAG CCTGATTCCG
GTCGATGTGA TCGATTTGCC GGTCGGCAAG CAGCGCTACG GCCTGCTGCT CAACGACGAA
GGCGGCATCA TCGATGATCT GATGTTCGTC AACCGGGGCA GCGATATTTT TGTCATCGTC
AACGGCGCCT GCAAGGCCGG TGACATCGCG CACATTCAGG CCAAGATTGG CACGCGCTGC
AAGGTCATCC CCATGCCGGA ACGCGCCCTG CTGGCGCTGC AAGGCCCGCT GGCCGTAACC
GCCCTGTCAC GGCTGGCACC GGGTGTTGAA AAGCTGGTGT TCATGACCGG TGGCAACTTC
ACCATTCAGG CGGGCAATCA GCGCATTGAC GTGTTCCTGA CCCGCAGCGG CTACACCGGC
GAAGATGGTT TTGAGATTTC GGTGCTCGAT TCCCAGGCGC AGGCGCTGGC GCAGGCACTG
CTGGCGCAAC CCGAAGTCAA ACCGATTGGC CTGGGCGCAC GCAATTCGCT GCGGCTGGAA
GCCGGACTGC CGCTCTATGG CAACGACATC GACACAACGA CCACACCGGT TGAAGCGAGT
TTGCAGTGGG CCATGCAAAA GGTGCGCCGC GCGGGTGGCG CGCGCGCCGG TGGTTTTCCG
GGTGCTGCAA AAATACTAGC ACAACTCGAA GGAGGAACGG GGGCTGCAGC CCGAAAACGT
GTTGGACTTT TGGCACTGGA GCGCATTCCC GTGCGCGAAC ACATCGAATT GCAGGATTTG
AATGGTCAGC ACATTGGCGA AGTGACCAGT GGTTTGCTTG GCCCCACCAT CGACCAGCCC
ATCGCCATGG GCTATGTGCC AACCGCGTTG GCTGCCTTGG GCACACGCAT CAACGCCATC
GTGCGTGGTA AACCCGTGCC GATGGAAGTG GTGGCGATGC CGTTTGTGCC GACCAACTAC
TTCCGCGGTT AA
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| Protein sequence | MAWTAVEAME FDMPLFLYWS SLMTTALESL LKTPLNDLHV SLGARMVPFA GYSMPVQYPA
GLMFEHKHTR TAAGLFDVSH MGQLRLVGPD AGAALESLIP VDVIDLPVGK QRYGLLLNDE
GGIIDDLMFV NRGSDIFVIV NGACKAGDIA HIQAKIGTRC KVIPMPERAL LALQGPLAVT
ALSRLAPGVE KLVFMTGGNF TIQAGNQRID VFLTRSGYTG EDGFEISVLD SQAQALAQAL
LAQPEVKPIG LGARNSLRLE AGLPLYGNDI DTTTTPVEAS LQWAMQKVRR AGGARAGGFP
GAAKILAQLE GGTGAAARKR VGLLALERIP VREHIELQDL NGQHIGEVTS GLLGPTIDQP
IAMGYVPTAL AALGTRINAI VRGKPVPMEV VAMPFVPTNY FRG
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