Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3018 |
Symbol | |
ID | 3960363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3327899 |
End bp | 3329617 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917838 |
Product | electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_524260 |
Protein GI | 89901789 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) [COG2440] Ferredoxin-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0545377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCATT ATCAGATGAG TTCAACCATG ACAAACCAGG AAATCTTGGC CCAGTTTGGC CCCCGCGAAG CGATGGAATA CGACGTCGTT GTTGTTGGAG GCGGCGTTGC CGGCCTGTCC ACCGCCATCC GCCTCAAGCA ACTGGCCACT GAAAAAGGCC AGGAGCTGTC GGTGGTGGTG CTGGAAAAAG GCGCCGAGCC CGGCGCCCAC ATCCTCTCGG GCGCCATCAT GGATCCCGTT GCCATGAATG AACTGTTCCC CGACTGGAAG GCCATGGGCG CGCCCCTGAA CCAGCCGGTG ACCGATGACG CCATGATGTT CCTGAGTGAA ACCTCGGGCT ATCGCACGCC CAATTTTCTG CTGCCCAAAT GCAGCCATAA CCACGGCAAC TACATCATCA GCCTGGGCGA GCTGACGCGC TGGCTGGCGA CCCAGGCCGA AAACATGGGC GTGGAAATAT TCCCCGGCTT TGCCGCCGCT GAAGTGCTTT ACAGCGAGCA AGGCGCCGTC AGAGGGGTCG CCACCGGCAA TATGGGTGTG AACAAGGAAG GCGAACCGGG CGAGAATTTC CAGATCGGCA TGGAGCTGTT GGCCAAATAC ACCATTTTTG CCGAAGGCTC ACGCGGTCAT CTGGGGCGCC AGCTGATTGC CAAGTACAAG CTTGACGAGG GCTGTGATCC GCAAAGTTAT GGTTTGGGCA TCAAGGAGGT TTGGGAGGTG GACCCCTCGC GCCACCAGCC TGGGTTTGCC ATGCACACCG CAGGCTGGCC GCTGGACAAC AGCACCTACG GCGGCTCCTT CATGTACCAC ATGGGGGACA ACAAGATCGC CTTGGGCTTC ATCACCGGGC TGAACTACCA AAACCCATTC TTAAGCCCGT TCGAGGAGTT CCAGCGCTGG AAAACCCATC CCAATGTGCG CTGGTATTTT GAGAACGACA AGGGCGAAGT CACCGCCAAG CGGCTGGCCT ATGGTGCGCG CACCATCACC GCCGGCGGTT TGCTGGCACT GCCCAAGACC GTGTTCCCGG GCGGCGCCCT GGTGGGTTGC GAAGCGGGCT TCCTGAACGT GAGCCGCATC AAGGGCAGCC ACACGGCCAT CAAGACCGGC ATGCTGGCAG CCGAGGCGGC GTTTGAGGCC GTCACGGCCG GACGCCAGCA TGACGAACTG AGCGCCTATC CCGAGGCGTT TGAGAACAGT TGGGTCTATA CCGAGCTCAA CAAATCGCGC AACTTCAAGG CCTGGTTCAA GTATGGCTTG CGCATCAGCA CCCTGATGAA TGGTTTCGAG CAGTTCGGAC TGGGGGGCAA CATGCCCTGG ACCATTCACC GTGACAAGCC CGACCATGCC TACCTCAAGC CCGCCGCCGA GTGCCAGCCC ATTGTTTACC CCAAGCCCGA CGGCAAGCTC ACCTTTGACC GCTTGAGCAG TGTCTTCATC GGCAACGTCA ACCATGAAGA AAATCAGCCC GCGCACTTGA CACTCAAAGA CGCGTCGGTG CCGGTTGCCA TCAACCTGGC CAAGTTTGCC GGCCCCGAGG CGCGCTACTG CCCGGCCGGG GTTTATGAGT TTGTCAAGAA CGATGACGGC ACCGACCGAC TGCAGATCAA CGCCTCCAAC TGCGTGCACT GCAAGACCTG CGACATCAAG GACCCGACGC AGAACATCGT CTGGGTCACG CCCGAAGGGG GCGGTGGACC CAACTACGCG GGGATGTAG
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Protein sequence | MPHYQMSSTM TNQEILAQFG PREAMEYDVV VVGGGVAGLS TAIRLKQLAT EKGQELSVVV LEKGAEPGAH ILSGAIMDPV AMNELFPDWK AMGAPLNQPV TDDAMMFLSE TSGYRTPNFL LPKCSHNHGN YIISLGELTR WLATQAENMG VEIFPGFAAA EVLYSEQGAV RGVATGNMGV NKEGEPGENF QIGMELLAKY TIFAEGSRGH LGRQLIAKYK LDEGCDPQSY GLGIKEVWEV DPSRHQPGFA MHTAGWPLDN STYGGSFMYH MGDNKIALGF ITGLNYQNPF LSPFEEFQRW KTHPNVRWYF ENDKGEVTAK RLAYGARTIT AGGLLALPKT VFPGGALVGC EAGFLNVSRI KGSHTAIKTG MLAAEAAFEA VTAGRQHDEL SAYPEAFENS WVYTELNKSR NFKAWFKYGL RISTLMNGFE QFGLGGNMPW TIHRDKPDHA YLKPAAECQP IVYPKPDGKL TFDRLSSVFI GNVNHEENQP AHLTLKDASV PVAINLAKFA GPEARYCPAG VYEFVKNDDG TDRLQINASN CVHCKTCDIK DPTQNIVWVT PEGGGGPNYA GM
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