| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3017 |
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| Symbol | |
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| ID | 3960362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3327007 |
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| End bp | 3327789 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917837 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_524259 |
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| Protein GI | 89901788 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTACA ACATTGATCT TTCAGGCCGG GTGGCATTCA TCACCGGCGC CTCCAGTGGC
CTGGGCGCCC AATTTGCAAA AACCCTGGCC AGCGCCGGTG CCGCCGTGGT GCTGGCGAGT
CGCCGACTGG ACAAACTGAA GGACTTGCGC GCCGAAATCG AAGGTCAGGG CGGCGACGCC
CATGCGATTG AACTCGATGT GACCGACATC GACTCCATCA AGTCGGCCGT GGCGCATGCC
GAGACCGAAG TCGGCTCGAT TGACATCCTG GTCAACAACT CGGGCGTCAG CACCACGCAA
CGCCTGCAGG ACGTGTCACC GGACGACTAT GACTATGTGT TCGACACCAA CGTCAAGGGC
GCTTTTTTTG TCGCGCAAGA GGTTGGCAAG CGCATGCTGG CGCGGTCCAA AGGCGCGGCA
CCCGGCACCT TCACGGGTGG GCGCATCGTC AACATTGCCT CGATGGCGGG CCTGCGCGTG
TTGCCGCAAA TTGGGGTCTA TTGCATGAGC AAGGCAGCGG TGGTGCAAAT GACCCGCGCC
ATGGCGCTGG AATGGGGCCG GTTTGGCATC AATGTCAACG CCATTTGCCC CGGTTACATC
GACACCGAGA TCAACCACCA GCACTGGCAC ACCGAACAGG GTAAAAAACT GGTGCAGATG
CTGCCACGCA AACGCGTTGG GCAGGCCAAA GACCTGGACG CTGTGCTGGT CATGCTGTGT
TCGGATCAAA GCCATTTCAT CAACGGCGCT GTGATCTCGG CCGACGATGG TTTTGGCGTC
TAG
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| Protein sequence | MAYNIDLSGR VAFITGASSG LGAQFAKTLA SAGAAVVLAS RRLDKLKDLR AEIEGQGGDA
HAIELDVTDI DSIKSAVAHA ETEVGSIDIL VNNSGVSTTQ RLQDVSPDDY DYVFDTNVKG
AFFVAQEVGK RMLARSKGAA PGTFTGGRIV NIASMAGLRV LPQIGVYCMS KAAVVQMTRA
MALEWGRFGI NVNAICPGYI DTEINHQHWH TEQGKKLVQM LPRKRVGQAK DLDAVLVMLC
SDQSHFINGA VISADDGFGV
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