| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3011 |
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| Symbol | |
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| ID | 3960356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3318546 |
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| End bp | 3320315 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637917831 |
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| Product | ribonucleotide reductase large subunit |
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| Protein accession | YP_524253 |
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| Protein GI | 89901782 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.758397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGT CTTCCTTTGA CACTGCAATT TCAGAGCATG TCTGGCGCAC CCGCTACTTG
TGGGCGGAGC CGGGCAGCGT GCCGGAGCCC GCTATTGAGA ACACCTGGGC GCGGGTGGCA
TTGGCCGTGT CGGGCGCCGA ACCTCACCAC CAGAATGATT GGCGCGAGCG TTTTCTGGCG
ATGCTCAGCG ATTGGCGCTT CCTGCCGGGC GGGCGCATAT TGGCCGGCGC GGGCACCTCG
CGCCGCGTGA CCCTGTTCAA TTGCCTGGCC ATGGGGCCCA TCGAGGATTC GGTGCAGGGT
ATCTTCAATG CGCTGCGCGA GGCGATGCAG TGCCTGCAGG CCGGCGGTGC TATCGGTATC
GACTTCTCTA CCCTGCGCCC CGCGTTGGCG CTGGCGCAGT CGAGTGGCGC GGTAGCCAGC
GGGCCGGTCT CGTTCATGAA CGTCTGGCAG GCGGCCAACG CGGTGCTGGA GGCGGGCAAC
CGGCGCCGCA GCGCCATGCT GGCGACGCTG CGTTGTGATC ACCCGGATAT CGAAGCTTTT
ATTGACGCCA AACTCGACAC CGGTGCCTTG TCGCACTTCA AGCTGTCGGT GCTGTTGAAT
GATGAGTTCA TGCAGGCGCT GCAGGAGGAC GGTCCGTGGC CGCTGGTTTT CCCGCTGGGC
GAACACCCGA TTCCGGTCGG CGGCGAAGTG TGCGAGCGCG TCTGGTCTGA CGGCGGACCA
CCGCAACTGT GCATGGTGCA CCGGCGCGTG CCCGCGCGCG CCTTGTGGGA GAAACTGCTG
CAAGCCCAAC ACGCCAGTGG CGAGCCGGGC GTGCTGTTCA TCGACCGGAT CAACCGCGCC
AACAATCTTT GGTATGACGA GCATTTGACG GTGGCCAACC CCGATGGGGG CGTGCCGCTG
CCGCCTTGGG GCGCGTGCAA TCTGGGGTCG ATCAACCTGA GCCGCTTTGT CCAGCAGCCG
TTTGCCGCAC ACCCCAGTGT CGATCTGGGT GGTCTGCGGG CCGTGGCGGC AGTGGCAACG
CGCTTTCTGG ACGACGTGTA TGACATCTCC CTGTTCCCCC TGAAAGCGCA GCAAAAGAGT
GCGCTGGCCA GCCGACGCAT TGGCCTGGGC GTCACCGGGC TGGCCGATAT GCTGGCCATG
CTGGGCCTGC GTTACGGTTC AGCGGCGAGC ATTGACCTGA CGCGCGAAAT CATGGGTGCT
ATCCGCGATA CCGCCTACCG TACGTCGGTC GAGCTGGCGC AGGAGAAAGG CGCGTTCCCC
GCCTGCGACA AGCTCAAATA TGGTGCCAGC CCGTTTGTGC TGGAACTCGA CCGCGCGCTG
CAGGATGCCA TCGCGCAACA CGGCATTCGC AACAGCCACC TGCTGGCGGT GGCACCCACA
GAGTCCATCA GCTTGCTGGC CAACAATGTG TCAAACGGCA TTGAGCCCAT GCGGGCTTTC
CAGGCCATGC GCCGGGTGCG CGGGGCTGAA GGGCAGGCCG TGTTTTTTGA CGTTGAGGAC
GCCGCCTGCC GCCAGTACCA AGCCCTGCAC GGACCGGATG CGCCCTGGCC GAAGCACTTT
GTGCAAGCCG CGGATGTGAG CGCCGAAGAC CAGTTGCAGC TGATGGCAGC GGTGCAGTCG
CACGTGGACA ACGCGCTGTC CAAAACCGTG TACCTGCCAG CGAGTGCCAG CGTGCAGGAT
GTGGGACTGG TGTTGCAACA GGCGTGGGAG CTGGGGCTCA AAGGCTGTTC AGTCGAGCGC
CAGGGCCATA CACCGACCGC CCTGATTTGA
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| Protein sequence | MFKSSFDTAI SEHVWRTRYL WAEPGSVPEP AIENTWARVA LAVSGAEPHH QNDWRERFLA
MLSDWRFLPG GRILAGAGTS RRVTLFNCLA MGPIEDSVQG IFNALREAMQ CLQAGGAIGI
DFSTLRPALA LAQSSGAVAS GPVSFMNVWQ AANAVLEAGN RRRSAMLATL RCDHPDIEAF
IDAKLDTGAL SHFKLSVLLN DEFMQALQED GPWPLVFPLG EHPIPVGGEV CERVWSDGGP
PQLCMVHRRV PARALWEKLL QAQHASGEPG VLFIDRINRA NNLWYDEHLT VANPDGGVPL
PPWGACNLGS INLSRFVQQP FAAHPSVDLG GLRAVAAVAT RFLDDVYDIS LFPLKAQQKS
ALASRRIGLG VTGLADMLAM LGLRYGSAAS IDLTREIMGA IRDTAYRTSV ELAQEKGAFP
ACDKLKYGAS PFVLELDRAL QDAIAQHGIR NSHLLAVAPT ESISLLANNV SNGIEPMRAF
QAMRRVRGAE GQAVFFDVED AACRQYQALH GPDAPWPKHF VQAADVSAED QLQLMAAVQS
HVDNALSKTV YLPASASVQD VGLVLQQAWE LGLKGCSVER QGHTPTALI
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