Gene Rfer_3001 details

Gene Information

• Locus tag: Rfer_3001
• ID: 3960346
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 3309298
• End bp: 3309831
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637917821
• Product: methylated-DNA--protein-cysteine methyltransferase
• Protein accession: YP_524243
• Protein GI: 89901772
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0350] Methylated DNA-protein cysteine methyltransferase
• TIGRFAM ID: [TIGR00589] O-6-methylguanine DNA methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTTG CACCATCCAC CGTTCAAGCC AGCTATGACA GCCCGCTTGG ACGCATCATT 
CTGGCCGCCG CCCACGATAG ATTGACAGGC GTGTGGTTTG ACGGCCAAAG CCATCAGCCG 
GACACCGCGC GCTGGCCTGT GGACCGCGAT CTGCCGGTGC TGCAACAGGC CAAAACCCAG 
TTGAGCGCGT ACTTTGCCGG TCGGCGTCAG GCCTTTGAGC TGGCGCTGGA TTTATCGGCT 
GGCACTGATT TTCAGCAATC CGTCTGGCGC GCCCTGCTGC AAATTCCGTT CGGAGCCACC 
CTGAGCTACG GTGCCCTGAG TGCCAGCATC GGCAAGCCCG CAGCCGTGCG TGCCGTGGCC 
GGCGCGGTGG CCCGCAATCC ATTGAGTATC ATCGTCCCCT GCCACCGCGT ACTCGGGGCA 
GGCGCGTCGC TCACCGGTTA CGCCGGTGGC TTGCCGCGCA AGACGGCGTT GCTGCAACTC 
GAAGGCGCAA GCTTCAAACC CGAACCAAAC CAGCCCCAAG AAGCCACACC TTGA 

 

Protein sequence

MKFAPSTVQA SYDSPLGRII LAAAHDRLTG VWFDGQSHQP DTARWPVDRD LPVLQQAKTQ 
LSAYFAGRRQ AFELALDLSA GTDFQQSVWR ALLQIPFGAT LSYGALSASI GKPAAVRAVA 
GAVARNPLSI IVPCHRVLGA GASLTGYAGG LPRKTALLQL EGASFKPEPN QPQEATP