| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2996 |
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| Symbol | |
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| ID | 3960341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3302639 |
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| End bp | 3303652 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917816 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_524238 |
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| Protein GI | 89901767 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCG TAATTCTTGA TGATTACCAG GACGCGGTTC GAAAACTCGA ATGCGCAGCC
AAACTGGCGC CCTACCCGGC CAAGGTTTAC ACCAACACAG TCAAGGGGCT TGGGCAGTTG
TCGGTGCGTC TCAAGGATGC CAGTGTGATC GTGCTCATCC GTGAACGCAC GCAGCTGCCG
CGCGCCTTGA TCGAGAAACT GCCCAAGCTC AAATTGATTG TGCAAACCGG GCGGGTTGGC
TCGCACATCG ACCTGGACGC CTGCACCGAG CTCGGGATTG CGGTGGCCGA GGGTTCCGGG
TCGCCGGTGG CGCCGGCCGA ACTCACCTGG GCCTTGATCC TGGCGGCCAT GCGCCGCCTG
CCCCAGTACA TTGGCAATCT CAAGCATGGT GCGTGGCAGC AATCGGGTTT GAAAACGGGC
TCGATGCCAC CCAACTTCGG CTTGGGGATG GTTCTGAAAG GCAAGACGCT GGGTATCTGG
GGTTACGGCA AAGTCGGCCG GCTGCTGGCG GGCTACGGCC AGGCCTTTGG CATGAAGGTG
CTGGTCTGGG GGCGGGCACC GGCGCGTGAA CGCGCTATTC TGGACGGGTT TGAAGCGGCC
CTGAGCCGGG ATGATTTTTT TGCCCAATCC GATGTCCTGT CGCTGCACCT GCGCCTGGTG
GATGAAACGC GCGGCATTGT CACACTCGAT GATCTGACGC GCATGAAGCC AACCGCCCTG
CTGGTCAACA CAGCCCGCGC CGAGTTGATC GAGCCCGATG CCTTGATCAG TGCCCTCAAC
CGGGGGCGGC CCGGCATGGC GGCGGTCGAT GTTTTCGAGA CCGAGCCGAT TTTGCAGGGG
CACGCCCTGT TGCGGCTGGA GAACTGCATT TGTACACCGC ACATCGGCTA TGTCGAGCAG
GACAGTTATG AGCTGTACTT TGGCGCAGCG TTTGACAACG TGATCAACTT CATCAAAGGC
ACGCCGACCA ACATCGTCAA TCCGGGCGCC TTGCAAGTTG AGCGGCGGCG CTAG
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| Protein sequence | MNIVILDDYQ DAVRKLECAA KLAPYPAKVY TNTVKGLGQL SVRLKDASVI VLIRERTQLP
RALIEKLPKL KLIVQTGRVG SHIDLDACTE LGIAVAEGSG SPVAPAELTW ALILAAMRRL
PQYIGNLKHG AWQQSGLKTG SMPPNFGLGM VLKGKTLGIW GYGKVGRLLA GYGQAFGMKV
LVWGRAPARE RAILDGFEAA LSRDDFFAQS DVLSLHLRLV DETRGIVTLD DLTRMKPTAL
LVNTARAELI EPDALISALN RGRPGMAAVD VFETEPILQG HALLRLENCI CTPHIGYVEQ
DSYELYFGAA FDNVINFIKG TPTNIVNPGA LQVERRR
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