Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2994 |
Symbol | |
ID | 3960339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3301478 |
End bp | 3302152 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917814 |
Product | LexA repressor |
Protein accession | YP_524236 |
Protein GI | 89901765 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.487407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGGAA GCCCTAAACT CACTGCCCGC CAGCAACAAA TTCTGGACCT GATCCAGAAC GCCATTACCC TCACTGGCTC GCCACCGACC CGGGCCGAGA TCGCCACCGA GCTCGGTTTC AGGTCTGCCA ACGCCGCCGA GGAACACTTG CAGGCGCTGG CGCGCAAAGG CGCCATCGAA CTCGTCAGCG GCACCTCGCG CGGTATTCGC CTCAAGAGCG AGGCACTGCG CTCCATCAAC GAATCCCGCA GCAAACAATT TCCCCTGTCG CTGCCCGGCC TGTCACAACT GATGCTGCCC CTGATTGGCC GCGTGGCAGC GGGCTCGCCG ATTCTCGCGC AAGAACATAT CGACCAAACC TATTACGTCG AAAGCAGCCT GTTCCAGCGC AAACCCGACT ACCTGCTCAA GGTGCGCGGC ATGTCGATGC GCGACGCCGG CATCATGGAC GGCGACCTGC TGGCCGTGCA ATCCACGCGG GACGCCAAAA ACGGCCAGAT TGTGGTGGCA CGCCTGGGTG ATGAAGTCAC CGTCAAGCGC TTTCGGCGCA CCAAGGACCT GATCGAACTG TGCCCGGAAA ACCCCGACTA CCAGATCATC GTCGTCGAAC CCGGCGAGCC CTTCGAGATT GAAGGGCTGG CAGTTGGCTT GATCCGCAAC ACCATGTTGA TGTGA
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Protein sequence | MLGSPKLTAR QQQILDLIQN AITLTGSPPT RAEIATELGF RSANAAEEHL QALARKGAIE LVSGTSRGIR LKSEALRSIN ESRSKQFPLS LPGLSQLMLP LIGRVAAGSP ILAQEHIDQT YYVESSLFQR KPDYLLKVRG MSMRDAGIMD GDLLAVQSTR DAKNGQIVVA RLGDEVTVKR FRRTKDLIEL CPENPDYQII VVEPGEPFEI EGLAVGLIRN TMLM
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