Gene Rfer_2994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2994 
Symbol 
ID3960339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3301478 
End bp3302152 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID637917814 
ProductLexA repressor 
Protein accessionYP_524236 
Protein GI89901765 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.487407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGGAA GCCCTAAACT CACTGCCCGC CAGCAACAAA TTCTGGACCT GATCCAGAAC 
GCCATTACCC TCACTGGCTC GCCACCGACC CGGGCCGAGA TCGCCACCGA GCTCGGTTTC
AGGTCTGCCA ACGCCGCCGA GGAACACTTG CAGGCGCTGG CGCGCAAAGG CGCCATCGAA
CTCGTCAGCG GCACCTCGCG CGGTATTCGC CTCAAGAGCG AGGCACTGCG CTCCATCAAC
GAATCCCGCA GCAAACAATT TCCCCTGTCG CTGCCCGGCC TGTCACAACT GATGCTGCCC
CTGATTGGCC GCGTGGCAGC GGGCTCGCCG ATTCTCGCGC AAGAACATAT CGACCAAACC
TATTACGTCG AAAGCAGCCT GTTCCAGCGC AAACCCGACT ACCTGCTCAA GGTGCGCGGC
ATGTCGATGC GCGACGCCGG CATCATGGAC GGCGACCTGC TGGCCGTGCA ATCCACGCGG
GACGCCAAAA ACGGCCAGAT TGTGGTGGCA CGCCTGGGTG ATGAAGTCAC CGTCAAGCGC
TTTCGGCGCA CCAAGGACCT GATCGAACTG TGCCCGGAAA ACCCCGACTA CCAGATCATC
GTCGTCGAAC CCGGCGAGCC CTTCGAGATT GAAGGGCTGG CAGTTGGCTT GATCCGCAAC
ACCATGTTGA TGTGA
 
Protein sequence
MLGSPKLTAR QQQILDLIQN AITLTGSPPT RAEIATELGF RSANAAEEHL QALARKGAIE 
LVSGTSRGIR LKSEALRSIN ESRSKQFPLS LPGLSQLMLP LIGRVAAGSP ILAQEHIDQT
YYVESSLFQR KPDYLLKVRG MSMRDAGIMD GDLLAVQSTR DAKNGQIVVA RLGDEVTVKR
FRRTKDLIEL CPENPDYQII VVEPGEPFEI EGLAVGLIRN TMLM