| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2992 |
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| Symbol | |
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| ID | 3960337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3297274 |
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| End bp | 3300318 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917812 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_524234 |
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| Protein GI | 89901763 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGGAA AGTGGGTTTC GTTTTTTTTC TGGTTCAAGG TGACGTTGGC ATCATCGCTG
CTGCTGGTGC TGGTCGTCGC GGGCCTGCTG GTCGCGCACG AGCTGCGCAC GTCGGACTAT
CAGGCGCGTT TCTTTGCCGG GCTGGCGGGC AAGGCCAGTT ACACGCTCGG TGCCGGTCCG
AGTCCGTCCA TCCGTTTCCC GCAGAGCGCA CCCTATGACG ATCGTCTCGG TTATTCGCTG
CTGCCGGTGT TTTTCGGCAA ATTGCGAACG CGGGATTTCG AGATCATCCA GCAGGCCCGG
ATTTCAGCGG ACATGGCCGA TATTGTCGAC AAAGGTTATT TCGCCCCCTA TCCGGAAAAG
ATCCAGGGCG GTCTGAGCAT CCTCGATTGC CACAAGGACA GTCTGTTTCA GGAGCGCTAT
CCGAAACGGG TGTTCGAACG CTTTGACGAC ATCGCACCCT TGCTGGTGCA AAGCCTGCTG
TTCATCGAGA ACCGTGAGCT GCTCGATCCA GAGCACCCCA AACGCAACCC GGCCGTGGAG
TGGGACCGGC TGGCCCATGC GGTGCTGATC AAGGCCCAGA GCACCCTCAC CGGCGACACC
AGAACACCTG GCGGCAGCAC GCTGGCGACC CAGATCGAAA AATACCGCCA TTCGTCCGAG
GGGCGCACCT CATCGGTCCA GGAAAAATTG CAACAAATGG TGTCGGCCGC CTTGCGCGCC
TACCAGCAGG GTGAAGATAC CAGCGCGGTG CGGCGCCAGA TTGTGCTGAG CTACGTGAAC
ACGATGCCGC TGTCCGCCAA AGCCGGCTTT GGCGAAGTGC ACGGCCTGGG CGATGGGCTG
TGGGTCTGGT ACGGGCGTGA TTTCAAGGAC GTCAACCGCA TTCTGAACCA TGTGCCCGCG
CAGACCGGCG ATGTCGGCGA GCAGGCGCAA ATTTACAAAC AGGCCTTGAG TCTGCTGATC
TCGCAGCGCC GCCCTTCCTA TTATTTCGAC GCCGATGAAG CCGAGCTGGA GCAGCTGACG
GACAGCCATC TGCGCCTGCT GGGCAGTGCC GGTGTGATCA CGCCGGCACT GCGCGATGCC
GCGCTCCAGG CGAAGCTGAA CCGGCGCGCC GACAAGGTGC CAGCGCCAGC GGTATCTTTC
GTCACGCAGA AGGCGGCCAA TGCGGTGCGC ACCCATCTGA CCGGCTTGCT GGGCGGCAAC
CGGCTGTACG ATCTGGATCG GCTCGATCTC AGCGTCGCCA GCACGCTGGA TGCGCCGGTG
CAGGCAGCCG CGACCAACCT GTTGCGCGAG TTGCGCGACC CGGCCAACGC CCGGGCGGCC
GGACTGTCGG CCAAACAGTT GCTCGACCGT GGCGATCCGT CCAAGGTGGT CTACAGCTTC
ACGCTCTATG AGCGCGGGGC CGAGGCCAAC TATTTGCGGG TGCAAACCGA CAACTTTGAT
CACCCGCTCA ATATCAACGA AGGCACCAAG CTCGATCTCG GCTCGACCGC CAAACTGCGC
ACGCTGGTGA CCTATCTCGA CATCATGGAC AAGCTGCATC AGCGGCTATC AACACTGGAC
AAGGCCCAAT TGCATGCGCT GGAAGTCGAC CGGCAGGACG TGTTGACGCG CTGGGCCGCC
GACTACTTTG CCACGACTGA GGACAAGAGC CTGAGCGCGA TGCTGGATGC GGCGCTGGAG
CGGCACTATT CCGCCAGTCC GGCAGAAGGG TTTATGACCG GCGGCGGGCT GCACCACTTC
AATAACTTCA AGCATGAGGA CGATGGCCGT GTGATGTCGG TGCGCGATGG ACTGCGCAAC
TCAGTCAATC TGGTGTTCAT CCGGCTGATG CGTGATGTCG TGCACCACTA CATGTTCCTG
ACCCCGGGCT CCTCGGCCAA GCTGCTGCGC GATGCCGACG ATCCGCGCCG CGCCGCCTAT
CTGGCGCGCT TTGCCGACAG CGAGGGCCAG GTCTTCATGC GCCGTTTCCT GGTCAAGTAC
CAGGGCAAAA CCGCACAAGA GGCGCAAGAG CTGCTGCTGG GCAACGTGCG CCCCACCGCC
TCGCGGCTGG CCGCCATCTT CCGCACCCTT TTCCCAGAGG CGCCGCTGGA CCAGTTCACA
GCCTGGGTGA AGGACAATTT GCCCGACGGC GTCAATCCGG CCGAGCCCAA GCTGGCCAAG
CTCTACGAGC AGTACGCGCC AGAGCGGATG TCGCTGGCCG ATCGCGGCTA CCTGGCGGGT
GTGCATCCGC TGGAGTTGTG GCTGGTCGGC TATCTGCGCA ACCATCCGGG CGCGAGCCAG
ACGCAGGTGA TGCAGGCCAG TGTGGCCGAG CGCCAGACGG TCTATGCCTG GCTGTTGTCC
ACCCATCGCA AGCAGGCACA GGACAAGCGG ATTCTGGGCC TGCTCGAAGG CGAAGGCTTT
CTGGAAATCC ACCGTCAGTG GGCGCAGATG GGCTATCCCT TCGAATCCCT GGTGCCCTCC
TATGCAAGCG CGCTGGGGGC CTCGGCCGAC CGCCCTGCCG CGCTGGCCGA ACTGATGGGA
ATACTCGTCA ATGATGGTGT GCGTAAGCCA AACACACGCA TCGAGTCGCT GCACTTCGCG
GCCGCCACGC CTTATGAAAC CCTGCTGCAG TACAAGCCGG CCAAGGCGGA AAAGGTGCTG
GCGCCCGAAG TGGCGCAAGC GGTGCGCGGC GCCATCCGGC GGGTGGTGGA GGAAGGCACC
GCGCAACGTG TGAAGCATGC CTTTGTGCGG CCTGACGGCA GCTTTGTCGC AGTCGGCGGC
AAGACCGGCA CCGGCGATCA GCGCTTCGAT ACGTTTGGTG CGGGCGGGCG CCTGATCGCC
TCGCGCGTGG TGAACCGCTC GGCGACCTTC GTCTTCAACA TCGACGAGCG ATTCTTCGGC
ACGCTGATCG CCTACGTGCC GGGCGCGCAG GCCGCCGCCT TCGATTTCAC CAGCGGCCTG
CCGGTGCAAT TGCTCAAAGT GCTGGCACCC AAACTGATGC CGCTGATCAT TGGCGGTGCC
GGCTGCGCGC CAGGCCACGC TGGCGAAAGC GCGGACCATC TCTAG
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| Protein sequence | MRGKWVSFFF WFKVTLASSL LLVLVVAGLL VAHELRTSDY QARFFAGLAG KASYTLGAGP
SPSIRFPQSA PYDDRLGYSL LPVFFGKLRT RDFEIIQQAR ISADMADIVD KGYFAPYPEK
IQGGLSILDC HKDSLFQERY PKRVFERFDD IAPLLVQSLL FIENRELLDP EHPKRNPAVE
WDRLAHAVLI KAQSTLTGDT RTPGGSTLAT QIEKYRHSSE GRTSSVQEKL QQMVSAALRA
YQQGEDTSAV RRQIVLSYVN TMPLSAKAGF GEVHGLGDGL WVWYGRDFKD VNRILNHVPA
QTGDVGEQAQ IYKQALSLLI SQRRPSYYFD ADEAELEQLT DSHLRLLGSA GVITPALRDA
ALQAKLNRRA DKVPAPAVSF VTQKAANAVR THLTGLLGGN RLYDLDRLDL SVASTLDAPV
QAAATNLLRE LRDPANARAA GLSAKQLLDR GDPSKVVYSF TLYERGAEAN YLRVQTDNFD
HPLNINEGTK LDLGSTAKLR TLVTYLDIMD KLHQRLSTLD KAQLHALEVD RQDVLTRWAA
DYFATTEDKS LSAMLDAALE RHYSASPAEG FMTGGGLHHF NNFKHEDDGR VMSVRDGLRN
SVNLVFIRLM RDVVHHYMFL TPGSSAKLLR DADDPRRAAY LARFADSEGQ VFMRRFLVKY
QGKTAQEAQE LLLGNVRPTA SRLAAIFRTL FPEAPLDQFT AWVKDNLPDG VNPAEPKLAK
LYEQYAPERM SLADRGYLAG VHPLELWLVG YLRNHPGASQ TQVMQASVAE RQTVYAWLLS
THRKQAQDKR ILGLLEGEGF LEIHRQWAQM GYPFESLVPS YASALGASAD RPAALAELMG
ILVNDGVRKP NTRIESLHFA AATPYETLLQ YKPAKAEKVL APEVAQAVRG AIRRVVEEGT
AQRVKHAFVR PDGSFVAVGG KTGTGDQRFD TFGAGGRLIA SRVVNRSATF VFNIDERFFG
TLIAYVPGAQ AAAFDFTSGL PVQLLKVLAP KLMPLIIGGA GCAPGHAGES ADHL
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