| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2982 |
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| Symbol | |
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| ID | 3960613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3288890 |
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| End bp | 3290452 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917802 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_524224 |
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| Protein GI | 89901753 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.980884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGA TTTGGATCGT AGATGATGAC CAGTCCATCC GCTTCGTGCT GGAGAAGGCG
CTGCTGCGAG AAGATTTGCC CACGCGCAGT TTCACCAGTT CGCGCGAGGT GCTGGCCGCG
CTCAATGACT GCAACGACGA CAACGCGCCA CGCGTGTTGG TGAGTGACAT TCGCATGCCG
GGCGGCTCGG GTTTGGATCT ACTGGAAAAA GTGAAGGAAA AATACCCTGC GCTGCCGGTG
ATCATCATGA CCGCGTATTC CGATCTGGAC AGCGCGGTAT CGGCCTTTCA GGGCGGCGCG
TTTGAATACC TGCCCAAGCC ATTTGACCTG TCCAAGGCGG TGGAGCTGAT TCGCCGCGCG
GTAGAAGAAA GCCAGCGCGA AGAAGTGGCG CAAGAACTCA CCTCCGACGC CCCCGAGATG
CTGGGACAGG CGCCGGCCAT GCAGGATGTG TTTCGCGCCA TCGGCCGTTT GAGCCAGAGC
AACGTCACGG TCATGATCAC CGGTGAGTCT GGCTCGGGCA AAGAGCTGGT GGCGCGTGCG
CTGCACAAGC ACTCGCCACG CGCCAAGGGG CCGTTTGTGG CGATCAACAC CGCGGCCATC
CCCAAAGATT TGCTGGAATC CGAACTGTTC GGGCACGAGC GCGGCGCCTT CACCGGCGCG
CAAGCCATGC GCCGGGGCCG CTTTGAGCAG GCCGATGGCG GCACGCTGTT TCTGGATGAA
ATCGGCGACA TGCCGTTTGA CCTGCAAACC CGTTTGTTGC GCGTCTTGAG CGACGGCCAT
TTTTACCGCG TGGGGGGCCA CAGCGCCGTC AAGACCAATG TGCGCGTGAT TGCCGCCACG
CACCAAAACC TGGAGCAACG CGTCAAGGAG GGCGCCTTCC GGGAGGATCT GTTTCACCGG
CTCAACGTCA TCCGCCTGCG CCTGCCGCCC TTGCGTGAGC GCAAGGAGGA CATTGCCGTA
CTGACGCGCC ACTTTTTGCA GCAAAGTGCC GCCCAGCTGG GTGTCGAGCC CAAGAGGATT
TCAGAAGCGG CCCTGGTGTG GCTCGGCAAC TTTGCCTTTC CGGGTAACGT GCGGCAGCTG
GAAAACATCT GCCACTGGTT GACCGTGATG GCGCCAGCAC AGGTGATCGA ACCCAAGGAC
TTGCCGCCGG AAGTGGGGGT GATGGCAACT GGCCCCGGTG AGACGCCGGC CGCCATGCCC
TCGCCCGCAA CCCTGATGAT GTCTGCCCCG CAACCGCACC CACCCGAGTC ATCGGTGGTA
GCCGCCACCG CAGGCCCAGA GTCAATGCCC TCTTACGGAT CGGCTGCCAC GGCGCCACCG
CAGCCTGGCA GCGCCGGTGA AGTGGTCGGG GCGGCCTGGG AGTTGGGGCT TGAAGCCGAG
GCCCTTGCCT TGCTGGCAAG TGGTCGCAAT GATGTGTGGG ACGCCCTGAC GCACCGTTTT
GAGGCGCGAT TGATTCTGGC CGCACTGGCC GTCACCCGGG GCCGACGCAT TGAGGCAGCC
CAAAAGCTGG GCATCGGGCG CAACACCATC ACGCGCAAGA TTCAGGAGTT GGGTTTGGAG
TAA
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| Protein sequence | MKPIWIVDDD QSIRFVLEKA LLREDLPTRS FTSSREVLAA LNDCNDDNAP RVLVSDIRMP
GGSGLDLLEK VKEKYPALPV IIMTAYSDLD SAVSAFQGGA FEYLPKPFDL SKAVELIRRA
VEESQREEVA QELTSDAPEM LGQAPAMQDV FRAIGRLSQS NVTVMITGES GSGKELVARA
LHKHSPRAKG PFVAINTAAI PKDLLESELF GHERGAFTGA QAMRRGRFEQ ADGGTLFLDE
IGDMPFDLQT RLLRVLSDGH FYRVGGHSAV KTNVRVIAAT HQNLEQRVKE GAFREDLFHR
LNVIRLRLPP LRERKEDIAV LTRHFLQQSA AQLGVEPKRI SEAALVWLGN FAFPGNVRQL
ENICHWLTVM APAQVIEPKD LPPEVGVMAT GPGETPAAMP SPATLMMSAP QPHPPESSVV
AATAGPESMP SYGSAATAPP QPGSAGEVVG AAWELGLEAE ALALLASGRN DVWDALTHRF
EARLILAALA VTRGRRIEAA QKLGIGRNTI TRKIQELGLE
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