| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2981 |
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| Symbol | |
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| ID | 3960612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3287749 |
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| End bp | 3288855 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917801 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_524223 |
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| Protein GI | 89901752 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACAAGC CCGATCACAC CCCGACTGCC CCTGACGTCG CGTCCAGCGC CGCGGCGACG
CTGCGCTTCC AGTCGTTTGA CCTGCTGGCC ACGCTGGTGG CAGTGGTGCA CAGCAATGGC
ACCGTCCTCT TTGCCAATGC CGCGCTGGAG GATGCGCGCG GCATGTCACG GCGCGCGATT
GTGGGCTCAT GCCTGTCCGA CAGCTTTACG GAACCCGCCC GCCTCCAACA GGCCCTGCAA
AGCGCGGATG ACAATGAATT TGCCGCCTTG CGCTATGACA CCTGGCTCAA ACGCTTGAAC
CACGAGCCAC TGCCGGTGCA CGTGATCGTG ACCCGGACTG AAACAGAAGA TGAAATTGTG
GTCGAGTTGC TGCCACTGGA GCAACAAGCG CGTCAGGACC GGGAGGAACG CCTGGCTGAG
CAGGCGCAGG CCAACAAAGA GTTGATTCGC AATCTGGCGC ACGAGATCAA GAACCCGCTG
GGCGGTATTC GCGGCGCGGC GCAGTTGCTG GAGCTCGAAA TGGACTCGGC AGAACTCACC
GAATACACGC AGGTCATCAT CCATGAGGCG GATCGTCTGC AAACACTGGT GGACCGGCTG
CTGGCACCGC ACCGGCGCCC GCATCTGGTG GGGGATGTCA ACATCCACGA GGTCTGTGAA
CATGTGCGGC TGCTCCTGTC GGCCGAATTC CCCAAGGGCC TGCAGGTGGT GCGCGACTTT
GACACCTCGA TTCCCGAGTT TCGCGGTGAC CGCGAGCAGC TTATTCAGAC CGTACTCAAC
ATTGCGCACA ACGCCTGCCA GGCGCTGGCA GCGCAGATAG CGCAAGGCAG CGCCTGCCTG
ACTTTTCGCA CGCGAATTGC GCGCCAGATC ACTTTTGGTA AACAACGCTA CCGGTTGGCA
CTGGAATTGC ATGTGATTGA CAACGGGCCT GGTGTACCAG ACTCGATCAA AGACCGCATT
TTCTATCCGC TGGTGTCAGG GCGTGAAGGC GGTTCGGGGC TGGGACTGAC ATTGGCGCAA
ACCTTTGTCC AGCAACACCA CGGCTTGATC GAGTGCGACA GTGTGCCGGG CTGCACGGAT
TTCAAGATAT TGATTCCACT CCCTTAA
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| Protein sequence | MDKPDHTPTA PDVASSAAAT LRFQSFDLLA TLVAVVHSNG TVLFANAALE DARGMSRRAI
VGSCLSDSFT EPARLQQALQ SADDNEFAAL RYDTWLKRLN HEPLPVHVIV TRTETEDEIV
VELLPLEQQA RQDREERLAE QAQANKELIR NLAHEIKNPL GGIRGAAQLL ELEMDSAELT
EYTQVIIHEA DRLQTLVDRL LAPHRRPHLV GDVNIHEVCE HVRLLLSAEF PKGLQVVRDF
DTSIPEFRGD REQLIQTVLN IAHNACQALA AQIAQGSACL TFRTRIARQI TFGKQRYRLA
LELHVIDNGP GVPDSIKDRI FYPLVSGREG GSGLGLTLAQ TFVQQHHGLI ECDSVPGCTD
FKILIPLP
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