| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2976 |
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| Symbol | |
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| ID | 3960607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3282938 |
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| End bp | 3283681 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917796 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_524218 |
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| Protein GI | 89901747 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.751101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTAC AAGACATTCT TTATTCCCAG GGCTTTGGTA CCCGGCGCGT GTGCGCCGGC
ATGATTCAGC AGGGATTGGT CGGTGTTTAT GAGTCAAATC AGGCTCTAGC CCCCGTCATA
TATACGCAAG CAGCTACTGA ATTTATAGCG GAAGGTTTGC GCTTGCGGGT TCAGGGCGTG
GACTGGCCTT ACCATGAAAA GGCCTACGTC ATGCTGCACA AACCCAGCGC CACCGAGTGC
TCCCAGAAGC CCTCCACCTA CCCCAGCGTT TACACCCTGC TGCCGTCTGC CCTGCGCCTG
CGCCCGCAAA AGGGCGCGGT GCAAGGCGTG CAGGCAGTTG GCCGCCTGGA TCAGGACACC
ACCGGGCTGC TGCTGCTCAC CGACGACGGC CAGTTCATCC ACCGCATGAA TTCGCCCCGT
CACCACGTGC CCAAGGTCTA TGAGGTCACG GTCAAGCACC CGCTCGACGA CACCCAGGTG
GCCCGGCTGC TGGCCGGCGT GGTGCTCGAC GACGACCCCA AACCAGTGCG CGCCGCTGCC
GCCGAGGCGG TATCCAGCCA CCACCTGCGC CTGACCCTGA CCGAGGGCAA ATACCACCAG
GTCAAGCGCA TGGTGGCCGC CGTCAGCAAC CGGGTGGAGG CCTTGCACCG CTCGCAAATC
GGAGGTTTGC GCCTGCCCGA TGATCTGGCA CCAGGCCAGT GGCGCTGGTT GAGCGCGGCC
GATCTGGCCA GCATCGCGGG CTGA
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| Protein sequence | MQLQDILYSQ GFGTRRVCAG MIQQGLVGVY ESNQALAPVI YTQAATEFIA EGLRLRVQGV
DWPYHEKAYV MLHKPSATEC SQKPSTYPSV YTLLPSALRL RPQKGAVQGV QAVGRLDQDT
TGLLLLTDDG QFIHRMNSPR HHVPKVYEVT VKHPLDDTQV ARLLAGVVLD DDPKPVRAAA
AEAVSSHHLR LTLTEGKYHQ VKRMVAAVSN RVEALHRSQI GGLRLPDDLA PGQWRWLSAA
DLASIAG
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