| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2970 |
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| Symbol | |
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| ID | 3960601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3276224 |
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| End bp | 3276877 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917790 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_524212 |
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| Protein GI | 89901741 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACC TAGCCGACAT CTTGCCGCCC CTGTTGCAGG GCAGTGGCAT CACGCTTCAG
GTCTTCCTGA TCACGCTGGT GCTCGCGGTG CCGCTCGGTC TGGGCCTGGC CTTGCTCAGA
ATTTCACGCT TTCGCTTTCT GAGTAGCCTG GTCAACGGCT ATATCTGGCT GATGCGCGGC
ACGCCGCTGA TGCTGCAGAT GCTGTTCATC TACTTTGCCC TGCCCTTCAT TCCGGTCGTT
GGTGTGCGTC TGCCTGACTT TCCGTCGGCG ATCCTCGCCT TTGTGCTGAA CTACTCCGCC
TATTTTGCGG AGATCTTCCG CGCCGGCATC CAGTCGATTG ACCGGGGTCA GTACGAAGGC
GCCCAGGTAC TGGGACTGAG CTATCCCCAG ACCATGCGCC GCATCGTGCT GCCGCAAGTG
CTCAAACGTA TCTTGCCACC CATGAGCAAC GAGACCATCA CGCTGGTCAA GGACACCTCG
CTGATCTATG TGCTGGCCAT GAATGATCTG CTGCGCGCGG CACGCGGCAT TGTTCAGCGC
GATTTCACGA CAATGCCGTT TGTGGTGGCG GCCGCCTTTT ATCTGTTCAT GACCCTGGTG
CTGACCTACG GCTTCCAGCG TCTGGAAAAG AAATACGCTG TTTATGATGA CTAG
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| Protein sequence | MNYLADILPP LLQGSGITLQ VFLITLVLAV PLGLGLALLR ISRFRFLSSL VNGYIWLMRG
TPLMLQMLFI YFALPFIPVV GVRLPDFPSA ILAFVLNYSA YFAEIFRAGI QSIDRGQYEG
AQVLGLSYPQ TMRRIVLPQV LKRILPPMSN ETITLVKDTS LIYVLAMNDL LRAARGIVQR
DFTTMPFVVA AAFYLFMTLV LTYGFQRLEK KYAVYDD
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