| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2962 |
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| Symbol | |
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| ID | 3962243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3269157 |
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| End bp | 3270206 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637917781 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_524204 |
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| Protein GI | 89901733 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.758944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC CCATTGCCAT CACACTCGGC GATTGCGCCG GCATTGGCCC TGAAATCATT
GCCAAGGCGT TCCGGGATGC GCCCGAACTC ACACGAGGCT GCTTTGTGGT GGGTGATGTC
GCGACCCTGC GGCGCGCGAC CAAGTTGATC GACGCCGGCG CCATCCCGCT ACCCGTGGCG
CTGATCGAGT CCCCAGCCGA GGCCCTCAAC GTGCCGCCGC GCTGCCTGCC GGTGCTGCAG
ATCGGGGCTC TGGCCGAGCC GGTGCCGTTT GGCCGCCTGA GCGCCGAGGC GGGAAAACTG
GCCGCCGAGT GCGTGACCTG GGCCGCGCAA GCCGCTTTAC GTGGTGAAAT TGCCGCACTG
GTCACGGCGC CATTGAACAA GGAAGCACTG GCGCTCGCGG GCACGCCCGG CACCCACTAT
CCGGGGCACA CCGAAATGCT GCAAGCGCTG GCGGCGGCGC ATACGCACAA GGCGCTGGCG
GAGATGCCGG TTCGCATGAT GCTGGCCAAT GATGAGTTGC GCGTGGTGCT GGTGAGCATT
CATGTGTCCT TGCGCGACGC GCTTGAGGCC GTCACGTTTG ACAACGTGTT GCAGACGCTG
CGCATTGCCC ATGCGGCCTT GAGCGCCAGT TTGGGCCGTG CACCGCGTAT CGCGGTGGCC
GGGCTCAACC CCCATGCCGG TGAAGGTGGG CTGTTTGGCC GTGAAGAAAT TGACATCATC
GCGCCCGCCA TTGCGGCGGC AAGCGCTTTG GGGTTGCAGG TCAGCGGCCC GTTCGCGCCC
GATACCGTGT TCATGCGCGC GCGCGCCAAA CCGGGCCAGC CGGGTGAATT TGATGCGGTG
CTGGCGATGT ACCACGACCA GGGCTTGATC CCGGTGAAAT ACCTGGGCGT CGAGCAGGGC
GTCAATGTGA CGCTCGGGTT GCCGCTGGTG CGCACCAGCC CGGACCACGG CACGGCGTTC
GACATTGCGG GTACCGGTCA GGCGGACGCA TCCAGCCTGC TGGCGGCCAT CGTCATGGCA
CGGCGTCTGA GTCAGCTGCA AAATTTATAG
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| Protein sequence | MKKPIAITLG DCAGIGPEII AKAFRDAPEL TRGCFVVGDV ATLRRATKLI DAGAIPLPVA
LIESPAEALN VPPRCLPVLQ IGALAEPVPF GRLSAEAGKL AAECVTWAAQ AALRGEIAAL
VTAPLNKEAL ALAGTPGTHY PGHTEMLQAL AAAHTHKALA EMPVRMMLAN DELRVVLVSI
HVSLRDALEA VTFDNVLQTL RIAHAALSAS LGRAPRIAVA GLNPHAGEGG LFGREEIDII
APAIAAASAL GLQVSGPFAP DTVFMRARAK PGQPGEFDAV LAMYHDQGLI PVKYLGVEQG
VNVTLGLPLV RTSPDHGTAF DIAGTGQADA SSLLAAIVMA RRLSQLQNL
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