Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2961 |
Symbol | |
ID | 3962242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3268384 |
End bp | 3269142 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917780 |
Product | hypothetical protein |
Protein accession | YP_524203 |
Protein GI | 89901732 |
COG category | [S] Function unknown |
COG ID | [COG0327] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.134812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCGTC GGACACAATT ACTGCAAGCC TTTGACGCCC TGCTACAACC CGAGCGCTTT CGCGACTACG GCCCAAACGG CCTGCAGGTC GAGGGCACGG ACACGGTGCG CAAAATCGTC TCCGGCGTCA CCGCCAGTCG GGCCCTGATC GAAGCGGCCA TTGCCGCGCA AGCGGACACT ATTTTTGTCC ATCACGGTTT ATTCTGGCGC GCTCAGGACG GGCGCATCAC GGGCTGGCTT AAAGCACGGC TGGCCCTGCT GCTTGCCGCT GACATCAACC TGTTCGCCTA CCACCTGCCG CTGGACGCGC ACGCGGAGCT GGGCAACAAC GCGCAACTGG GTCTGAAACT GGGTCTGCGC GCGCTGACGC GCTTTGGCGA ACAGGAACTG GGGTTTCTGG GCGAACCGAT GGCGTCTGCC AGTTTTGCCT CTGCCGAAAC GCTGGCCCAG CATATTGAAT ATGTACTGAA TCGACCTGTA GCCCTCGTCG GACCTGCACA TAGCGCTATC AAAAAAGTTG CGTGGTGCAG CGGCGGCGGG CAAAACTATT TTGAAGCTGC CATTGCCGCT GGCGCCGATG CCTTCATCAC CGGCGAGATC TCTGAGCCGC AGGCGCACTT GGCACGCGAG TGCGGCGTGG CCTATCTGGC CTGCGGCCAC CACGCCAGTG AACGCTATGG TGCGCCCGCC GTGGCGGCAC AGGTGGCGGC CCAGTTCGGC CTGGCGCACG AATTCATTGA CATTGACAAC CCGGCTTGA
|
Protein sequence | MTRRTQLLQA FDALLQPERF RDYGPNGLQV EGTDTVRKIV SGVTASRALI EAAIAAQADT IFVHHGLFWR AQDGRITGWL KARLALLLAA DINLFAYHLP LDAHAELGNN AQLGLKLGLR ALTRFGEQEL GFLGEPMASA SFASAETLAQ HIEYVLNRPV ALVGPAHSAI KKVAWCSGGG QNYFEAAIAA GADAFITGEI SEPQAHLARE CGVAYLACGH HASERYGAPA VAAQVAAQFG LAHEFIDIDN PA
|
| |